RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 OR5D16Q8NGK9 328 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 OR4A15Q8NGL6 344 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 GPR119Q8TDV5 335 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 TMEM234Q8WY98 164 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 S100PBPQ96BU1 408 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 COX4I2Q96KJ9 171 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 SRXN1Q9BYN0 137 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 GSX2Q9BZM3 304 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 NMUR2Q9GZQ4 415 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 ESRP2Q9H6T0 727 aaKnown RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 SERINC1Q9NRX5 453 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 ICAM5Q9UMF0 924 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 SPIN1Q9Y657 262 aaPredicted RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 ROS1P08922 2347 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 SERINC4A6NH21 518 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 HS3ST1O14792 307 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 CLOCKO15516 846 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 KLF4O43474 513 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 OIP5O43482 229 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 CSTAP01040 98 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 SERPINE1P05121 402 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 FESP07332 822 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 YES1P07947 543 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 MYZAPP0CAP1 466 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 PGCP20142 388 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ENPP1P22413 925 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 LOXP28300 417 aaPredicted RBP10.49□□□□□ -0.73
TTC28-203ENST00000442232 SHC1P29353 583 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 CLDN8P56748 225 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 C21orf58P58505 322 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 RAC3P60763 192 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 RPS4XP62701 263 aaKnown RBP10.49□□□□□ -0.73
TTC28-203ENST00000442232 RPS26P62854 115 aaKnown RBP10.49□□□□□ -0.73
TTC28-203ENST00000442232 P2RY6Q15077 328 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 QPRTQ15274 297 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 NDUFAF6Q330K2 333 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 OR4F3Q6IEY1 312 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 TFAP2EQ6VUC0 442 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 C6orf120Q7Z4R8 191 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 RIMKLAQ8IXN7 391 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ZNF611Q8N823 705 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 NUDT8Q8WV74 236 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ST8SIA1Q92185 356 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ZHX1-C8orf76Q96EF9 292 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ARSGQ96EG1 525 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 PPP1R36Q96LQ0 422 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 OR5B2Q96R09 309 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 SDF2Q99470 211 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 KLHDC3Q9BQ90 382 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 POTEKPQ9BYX7 375 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 DPY30Q9C005 99 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 ASIC5Q9NY37 505 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 KCNE3Q9Y6H6 103 aa10.49□□□□□ -0.73
TTC28-203ENST00000442232 WDR91A4D1P6 747 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 NPIPB9F8W1W9 429 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 RNASET2O00584 256 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 LY6G6DO95868 133 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 CD3EP07766 207 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 UBTFL6P0CB48 400 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 CHI3L1P36222 383 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 KHKP50053 298 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 ATP5J2P56134 94 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 CSNK2A1P68400 391 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 PPP2R2BQ00005 443 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 RASGEF1BQ0VAM2 473 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 MERTKQ12866 999 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 CHI3L2Q15782 390 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 TOMM34Q15785 309 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 ARHGAP11BQ3KRB8 267 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 SLC25A53Q5H9E4 307 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 SFRP5Q5T4F7 317 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 ANXA8L1Q5VT79 327 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 C22orf34Q6ZV56 151 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 EIF3MQ7L2H7 374 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 BHLHA15Q7RTS1 189 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 NUFIP2Q7Z417 695 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 ZNF619Q8N2I2 560 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 AENQ8WTP8 325 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 SLC25A43Q8WUT9 341 aaPredicted RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 HSD17B8Q92506 261 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 AKAP1Q92667 903 aaKnown RBP eCLIP10.48□□□□□ -0.73
TTC28-203ENST00000442232 FBXW5Q969U6 566 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 PKNOX2Q96KN3 472 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 THUMPD3Q9BV44 507 aaKnown RBP10.48□□□□□ -0.73
TTC28-203ENST00000442232 LAT2Q9GZY6 243 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 COQ10BQ9H8M1 238 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 EMC3Q9P0I2 261 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 ABCA2Q9BZC7 2435 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 FREM1Q5H8C1 2179 aa10.48□□□□□ -0.73
TTC28-203ENST00000442232 IGHV3-15A0A0B4J1V0 119 aa10.47□□□□□ -0.73
TTC28-203ENST00000442232 A0A1W2PNR3 127 aa10.47□□□□□ -0.73
TTC28-203ENST00000442232 TRIM64A6NGJ6 449 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms