RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 GPR32P1Q8NGA4 272 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR4D11Q8NGI4 311 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR5M11Q96RB7 305 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DUSP26Q9BV47 211 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZCCHC3Q9NUD5 404 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 TAS2R9Q9NYW1 312 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 BOKQ9UMX3 212 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 IFT52Q9Y366 437 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SAMHD1Q9Y3Z3 626 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 A0A075B6Q4 140 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 EVPLLA8MZ36 301 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 PDPK1O15530 556 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPX5O75715 221 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC25A12O75746 678 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SEMA3DO95025 777 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF682O95780 498 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPR75O95800 540 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTTG1O95997 202 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 PEBP1P30086 187 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SMSP52788 366 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 LSM3P62310 102 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SRYQ05066 204 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPR50Q13585 617 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GNA13Q14344 377 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR1C1Q15619 314 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ABHD17CQ6PCB6 329 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF675Q8TD23 568 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 WDFY2Q96P53 400 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 PANX1Q96RD7 426 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 DEFB127Q9H1M4 99 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 WDR54Q9H977 334 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 DMRT3Q9NQL9 472 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TAS2R16Q9NYV7 291 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 CNOT2Q9NZN8 540 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TESMINQ9Y4I5 508 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SNX5Q9Y5X3 404 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 NUP210LQ5VU65 1888 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCO2O43819 266 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SNRPGP62308 76 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ELAVL1Q15717 326 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TRIM16LQ309B1 348 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC25A25Q6KCM7 469 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 JMJD6Q6NYC1 403 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM180BQ6P0A1 224 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 AHSA2Q719I0 299 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 RNF44Q7L0R7 432 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 C10orf53Q8N6V4 93 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 B3GNT7Q8NFL0 401 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR52N2Q8NGI0 321 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR6F1Q8NGZ6 308 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR14L1PQ8NHC6 308 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 XAGE5Q8WWM1 108 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 KAT2AQ92830 837 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TMCO6Q96DC7 493 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SENP5Q96HI0 755 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 COPS4Q9BT78 406 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TMEM121BQ9BXQ6 578 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 AICDAQ9GZX7 198 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 RASSF1Q9NS23 344 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SEC14L3Q9UDX4 400 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 MAPRE3Q9UPY8 281 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 LRIT2A6NDA9 550 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GNB5O14775 395 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 DLGAP3O95886 979 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 IL3P08700 152 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 STSP08842 583 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ARAFP10398 606 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ETFAP13804 333 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GTF2E2P29084 291 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TIA1P31483 386 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 CASP3P42574 277 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF169Q14929 603 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SEC23BQ15437 767 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 EXOC3L2Q2M3D2 409 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GLYR1Q49A26 553 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 GPAT3Q53EU6 434 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF425Q6IV72 752 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF585AQ6P3V2 769 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 USP43Q70EL4 1123 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 COMMD6Q7Z4G1 85 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 LRRC25Q8N386 305 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 BMPERQ8N8U9 685 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 YIPF4Q9BSR8 244 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 EHD1Q9H4M9 534 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 SIRT3Q9NTG7 399 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 TESQ9UGI8 421 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 DAPP1Q9UN19 280 aa6.81□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR5H15A6NDH6 313 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 NPIPA2E9PIF3 369 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 NPIPA3F8WFD2 350 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 GNGT2O14610 69 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 GASTP01350 101 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 CTSBP07858 339 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF45Q02386 682 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 BIKQ13323 160 aa6.8□□□□□ -1.32
CDC42BPA-208ENST00000442054 SNTA1Q13424 505 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms