RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 URADA6NGE7 173 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TTC36A6NLP5 189 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HEPACAM2A8MVW5 462 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF701M0R085 212 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 FOXE1O00358 373 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PI15O43692 258 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HS6ST1O60243 411 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 LDB3O75112 727 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 UGT2B11O75310 529 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SH3BGRLO75368 114 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRMUO75648 421 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TPPPO94811 219 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ETHE1O95571 254 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF682O95780 498 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLIC3O95833 236 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC16A8O95907 504 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SOD1P00441 154 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TFP02787 698 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 FABP3P05413 133 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ABCB1P08183 1280 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 LAMP1P11279 417 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CPT2P23786 658 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CXCR2P25025 360 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ACADLP28330 430 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TNFSF8P32971 234 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 KDELR2P33947 212 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RYKP34925 604 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HSD17B2P37059 387 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HPCAL1P37235 193 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DCTP40126 519 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 MAGEA2P43356 314 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAPZA2P47755 286 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HLCSP50747 726 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 METAP1P53582 386 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PNLIPRP2P54317 469 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 NUP107P57740 925 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SELENOVP59797 346 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TBPL1P62380 186 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PPP2R2BQ00005 443 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 C2orf80Q0P641 193 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 Q0VFX4 171 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RPA4Q13156 261 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PMS2P3Q13401 168 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL18R1Q13478 541 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TSTA3Q13630 321 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RUNX3Q13761 415 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RUNX2Q13950 521 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 VEZF1Q14119 521 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ELAVL3Q14576 367 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF234Q14588 700 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DUSP6Q16828 381 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HKDC1Q2TB90 917 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RFX4Q33E94 735 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PYCR3Q53H96 274 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SOWAHCQ53LP3 525 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR2T5Q6IEZ7 315 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PNCKQ6P2M8 343 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SHQ1Q6PI26 577 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SPESP1Q6UW49 350 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 UNC5DQ6UXZ4 953 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 KCTD8Q6ZWB6 473 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 EIF3MQ7L2H7 374 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 LPCAT2Q7L5N7 544 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PIWIL3Q7Z3Z3 882 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAMKMTQ7Z624 323 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM179BQ7Z7N9 219 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DSG4Q86SJ6 1040 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 GLRX5Q86SX6 157 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMPRSS11BQ86T26 416 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRIM74Q86UV6 250 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRIM73Q86UV7 250 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 AMZ2Q86W34 360 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLVS1Q8IUQ0 354 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRAPPC5Q8IUR0 188 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 MMAAQ8IVH4 418 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZDHHC21Q8IVQ6 265 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 OFCC1Q8IZS5 231 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLECL1Q8IZS7 167 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 C10orf111Q8N326 155 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBMXL3Q8N7X1 1067 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ARL10Q8N8L6 244 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR2T29Q8NH02 315 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR2L2Q8NH16 312 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 HUS1BQ8NHY5 278 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF420Q8TAQ5 688 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CXorf40AQ8TE69 158 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC5A11Q8WWX8 675 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 NEIL2Q969S2 332 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RAD51AP1Q96B01 352 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMCO6Q96DC7 493 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 CXorf40BQ96DE9 158 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 MTERF3Q96E29 417 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DTNBP1Q96EV8 351 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 C11orf24Q96F05 449 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 MUS81Q96NY9 551 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR4K3Q96R72 315 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 GFM1Q96RP9 751 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 MBOAT4Q96T53 435 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TUBA1CQ9BQE3 449 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADNPQ9H2P0 1102 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms