RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 WNT1P04628 370 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ADRB1P08588 477 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 DDX6P26196 483 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PBX2P40425 430 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CCR4P51679 360 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR12D2P58182 307 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CSNK1G2P78368 415 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 STX4Q12846 297 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CDC73Q6P1J9 531 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 KCTD20Q7Z5Y7 419 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 NRSN1Q8IZ57 195 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TCTE3Q8IZS6 198 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TBC1D19Q8N5T2 526 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 C10orf53Q8N6V4 93 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 NUP43Q8NFH3 380 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TNFAIP8L1Q8WVP5 186 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 DERL3Q96Q80 235 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 FN3KQ9H479 309 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 NIPAL2Q9H841 368 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CD93Q9NPY3 652 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 KLK11Q9UBX7 282 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 GPR55Q9Y2T6 319 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CDH10Q9Y6N8 788 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 A0A1W2PR48 441 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 FOXE1O00358 373 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 SPINT1O43278 529 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 B4GALT2O60909 372 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ATG12O94817 140 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 RPS27P42677 84 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 RAD52P43351 418 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PITPNBP48739 271 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 GDI2P50395 445 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 LIN54Q6MZP7 749 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF793Q6ZN11 406 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 SIRT6Q8N6T7 355 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR5K2Q8NHB8 316 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM255BQ8WV15 326 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZMYND19Q96E35 227 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ERMAPQ96PL5 475 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CCDC3Q9BQI4 270 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 RSPO3Q9BXY4 272 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 DPEP2Q9H4A9 486 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 NEUROD4Q9HD90 331 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 B3GNT2Q9NY97 397 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 SCN8AQ9UQD0 1980 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TRAV27A0A087WT01 109 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PDCD5O14737 125 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 VEGFDO43915 354 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 HCN1O60741 890 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 FZD7O75084 574 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 EFEMP2O95967 443 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRPH2P23942 346 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 BSGP35613 385 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TEKQ02763 1124 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TFF2Q03403 129 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SQSTM1Q13501 440 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 OPCMLQ14982 345 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC36A4Q6YBV0 504 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRSS58Q8IYP2 241 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 DNAAF1Q8NEP3 725 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 C17orf47Q8NEP4 570 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 RBP7Q96R05 134 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 MCHR1Q99705 422 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PIGUQ9H490 435 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZMAT3Q9HA38 289 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 MLXQ9UH92 298 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ENOPH1Q9UHY7 261 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 NUP50Q9UKX7 468 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TRAPPC4Q9Y296 219 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 A0A087WUU8 490 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 AIFM1O95831 613 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACADLP28330 430 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 MPIP34949 423 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 RAB28P51157 221 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TAS2R38P59533 333 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 DUSP2Q05923 314 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 RPE65Q16518 533 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF628Q5EBL2 1059 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM240Q5SV17 173 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC16A11Q8NCK7 471 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 FBXO15Q8NCQ5 510 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 DVL3Q92997 716 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 NKD1Q969G9 470 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SGTBQ96EQ0 304 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 C4orf36Q96KX1 117 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 AMDHD1Q96NU7 426 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ALG8Q9BVK2 526 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 HCAR1Q9BXC0 346 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PFDN2Q9UHV9 154 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 LHX6Q9UPM6 363 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 LSM2Q9Y333 95 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 MN1Q10571 1320 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms