RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SYPL1Q16563 259 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 SLC25A53Q5H9E4 307 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 COX20Q5RI15 118 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 PPP4R4Q6NUP7 873 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 ANKFN1Q8N957 763 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 CNEP1R1Q8N9A8 125 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 TMEM234Q8WY98 164 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 ST8SIA1Q92185 356 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 GTF2H4Q92759 462 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 RABEP2Q9H5N1 569 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 SLC6A13Q9NSD5 602 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 CCDC167Q9P0B6 97 aa22.22■■□□□ 1.15
RAPGEF1-206ENST00000438647 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 ETV2O00321 342 aaPredicted RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 EDF1O60869 148 aaKnown RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 DNAJA2O60884 412 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 TNFSF13O75888 250 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 PGM1P36871 562 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 CRATP43155 626 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 KCNJ10P78508 379 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 SORDQ00796 357 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 SELENBP1Q13228 472 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 SQLEQ14534 574 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 CTU2Q2VPK5 515 aaKnown RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 HBMQ6B0K9 141 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 BLOC1S3Q6QNY0 202 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 LUZP2Q86TE4 346 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 ARFGAP2Q8N6H7 521 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 FAM71CQ8NEG0 241 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 SPDL1Q96EA4 605 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 THUMPD3Q9BV44 507 aaKnown RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 RBM24Q9BX46 236 aaKnown RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 SLC38A1Q9H2H9 487 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 RAD21L1Q9H4I0 556 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 MTHFD2LQ9H903 347 aaPredicted RBP22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 TIGARQ9NQ88 270 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 CALML5Q9NZT1 146 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 TRIM33Q9UPN9 1127 aa22.21■■□□□ 1.15
RAPGEF1-206ENST00000438647 ANKHD1Q8IWZ3 2542 aaKnown RBP22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 TMEM247A6NEH6 219 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 TNFSF11O14788 317 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 MSTNO14793 375 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 NTN1O95631 604 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 OPN1LWP04000 364 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 CHRM4P08173 479 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 SFTPDP35247 375 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 MVDP53602 400 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 SLC2A7Q6PXP3 512 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 CMIPQ8IY22 773 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZG16BQ96DA0 208 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 LURAP1Q96LR2 239 aa22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 EXOSC3Q9NQT5 275 aaKnown RBP22.2■■□□□ 1.14
RAPGEF1-206ENST00000438647 LRBAP50851 2863 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 A0A096LPI6 279 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 A0A0J9YW62 118 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 AGAP5A6NIR3 686 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 NR5A2O00482 541 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 CXCL13O43927 109 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 ETFAP13804 333 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 CAPN3P20807 821 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 IL11P20809 199 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 CRISP3P54108 245 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 CARD18P57730 90 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 DSTNP60981 165 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 GTDC1Q4AE62 458 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 HSP90B2PQ58FF3 399 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 FUNDC1Q8IVP5 155 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 STARD4Q96DR4 205 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 PAIP1Q9H074 479 aaKnown RBP22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 QRSL1Q9H0R6 528 aaKnown RBP22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 GLRX2Q9NS18 164 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZNF446Q9NWS9 450 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 PCDHB14Q9Y5E9 798 aa22.19■■□□□ 1.14
RAPGEF1-206ENST00000438647 A8MXE2 369 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 SMNDC1O75940 238 aaKnown RBP eCLIP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 AQP8O94778 261 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 PLGP00747 810 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 DBIP07108 87 aaKnown RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 PABPC4LP0CB38 370 aaKnown RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 IL7RP16871 459 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 KIR2DL2P43627 348 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 SLC6A8P48029 635 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 FADDQ13158 208 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 GTF2IRD2BQ6EKJ0 949 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 C3orf33Q6P1S2 294 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 FAM214BQ7L5A3 538 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 GTF2IRD2Q86UP8 949 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 PEX5LQ8IYB4 626 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 FAM222BQ8WU58 562 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 WDR60Q8WVS4 1066 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 OSTF1Q92882 214 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 CPNE4Q96A23 557 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 AURKBQ96GD4 344 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 REXO5Q96IC2 774 aaKnown RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 GMPPAQ96IJ6 420 aaPredicted RBP22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 NPHS2Q9NP85 383 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 SERINC1Q9NRX5 453 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 GALNT8Q9NY28 637 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 DCTN4Q9UJW0 460 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 EMC9Q9Y3B6 208 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms