RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SURF4O15260 269 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ZNF217O75362 1048 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PRKACBP22694 351 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ZNF45Q02386 682 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PLAURQ03405 335 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 KCNAB1Q14722 419 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 LARS2Q15031 903 aaKnown RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 TMEM201Q5SNT2 666 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PDZK1Q5T2W1 519 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 OTPQ5XKR4 325 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 OOSP2Q86WS3 158 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 LRRC17Q8N6Y2 441 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 OR52R1Q8NGF1 315 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ACOT11Q8WXI4 607 aaPredicted RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 TM4SF19Q96DZ7 209 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 TGM7Q96PF1 710 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 MS4A4EQ96PG1 132 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SLC38A2Q96QD8 506 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ARHGDIGQ99819 225 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PRSS27Q9BQR3 290 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 KATNB1Q9BVA0 655 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PPIL3Q9H2H8 161 aaKnown RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 OR52D1Q9H346 318 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 NDUFB11Q9NX14 153 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PLEKHB1Q9UF11 243 aaPredicted RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 NDOR1Q9UHB4 597 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 DIMT1Q9UNQ2 313 aaKnown RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 MED12Q93074 2177 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 DUXAA6NLW8 204 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 C17orf51A8MQB3 221 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ZNF670-ZNF695F2Z2N8 137 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 H3BSH0 61 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 TMCC2O75069 709 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SLITRK5O94991 958 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 IGLV3-19P01714 112 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PIPP12273 146 aaPredicted RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 SLC1A3P43003 542 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ANXA11P50995 505 aaKnown RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 FAM53BQ14153 422 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 GNA13Q14344 377 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 P2RY14Q15391 338 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 AMZ1Q400G9 498 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 IL20RBQ6UXL0 311 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SLC36A4Q6YBV0 504 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 MAML2Q8IZL2 1156 aaPredicted RBP8.76□□□□□ -1.01
CUX1-206ENST00000437600 OR2L13Q8N349 312 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PTP4A1Q93096 173 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SPACA7Q96KW9 195 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SLC38A3Q99624 504 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 ZNF559Q9BR84 538 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SARGQ9BW04 601 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 B3GNT4Q9C0J1 378 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 MIXL1Q9H2W2 232 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 NEK6Q9HC98 313 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SEC14L4Q9UDX3 406 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 CBLCQ9ULV8 474 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 SPTBN2O15020 2390 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 A0A0B4J203 849 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 KIR2DS5A0A0G2JLQ3 304 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 A0A0G2JNG1 304 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 A0A0J9YY10 115 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 A0A1W2PQ09 198 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 HYKKA2RU49 373 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 FABP12A6NFH5 140 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 C4orf47A7E2U8 309 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 C12orf71A8MTZ7 269 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 A8MUA0 341 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 FAM171A2A8MVW0 826 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 KIR2DS3K7RE56 304 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 TAF4O00268 1085 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CYR61O00622 381 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR10H2O60403 315 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SOX30O94993 753 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MAOAP21397 527 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ACVR1BP36896 505 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 DHPSP49366 369 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 PRKCDQ05655 676 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MLLT11Q13015 90 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 KIR2DS5Q14953 304 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ARMC4Q5T2S8 1044 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MEDAGQ5VYS4 303 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 FIP1L1Q6UN15 594 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 USP53Q70EK8 1073 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CAMKVQ8NCB2 501 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR10H4Q8NGA5 316 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ORAI1Q96D31 301 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 TNFRSF13CQ96RJ3 184 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SERINC2Q96SA4 455 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 IFT27Q9BW83 186 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MEPEQ9NQ76 525 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 SIDT1Q9NXL6 827 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 IL20Q9NYY1 176 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF346Q9UL40 294 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 V9GYH0 126 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 RTTNQ86VV8 2226 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms