RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GOSR2O14653 212 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PRAF2O60831 178 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 POP4O95707 220 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 GIPP09681 153 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PPP3CBP16298 524 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 STAT5AP42229 794 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SHC2P98077 582 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 TGM3Q08188 693 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 GDPD4Q6W3E5 623 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ZNF620Q6ZNG0 422 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 OR2AG1Q9H205 316 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC7A7Q9UM01 511 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ERVK-19Q9WJR5 959 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 Q9Y3F1 56 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PLXND1Q9Y4D7 1925 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 GAAP10253 952 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 HOXB3P14651 431 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 IFNGR1P15260 489 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 ACHEP22303 614 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 NOS3P29474 1203 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 MAT2AP31153 395 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 STARP49675 285 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 MRGPREQ86SM8 312 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 OR52L1Q8NGH7 329 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 SUN3Q8TAQ9 357 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 FCAMRQ8WWV6 532 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 WNT2BQ93097 391 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 GLYATL1Q969I3 302 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 UBE2E3Q969T4 207 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 AHCYL2Q96HN2 611 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 LRIG1Q96JA1 1093 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 CAMK1GQ96NX5 476 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 OR52D1Q9H346 318 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 OR10H1Q9Y4A9 318 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 TRPM7Q96QT4 1865 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 A0A1B0GUH1 482 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 A0A1W2PS29 197 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 UBE2QL1A1L167 161 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 OR1F1O43749 312 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 FCMRO60667 390 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 GLAP06280 429 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 PSMB5P28074 263 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 KHKP50053 298 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 PCBP4P57723 403 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 STX4Q12846 297 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 CAMK1Q14012 370 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 C2orf68Q2NKX9 166 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 FAM69AQ5T7M9 428 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 NIPAL3Q6P499 406 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 ARL14Q8N4G2 192 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 ACOT11Q8WXI4 607 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 RAD51AP1Q96B01 352 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 RGMAQ96B86 450 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC41A3Q96GZ6 507 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 PDCD1LG2Q9BQ51 273 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 MFFQ9GZY8 342 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 KLHL28Q9NXS3 571 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 NPFFR2Q9Y5X5 522 aa10.73□□□□□ -0.69
HMGCS1-202ENST00000433297 CARNS1A5YM72 827 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 H3BSH0 61 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 PSMD9O00233 223 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 PLPP2O43688 288 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 B3GALNT1O75752 331 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 KRT33AO76009 404 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ATP1B1P05026 303 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GALP22466 123 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 MAOBP27338 520 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 TEAD1P28347 426 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 SSR2P43308 183 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GDI2P50395 445 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 SORDQ00796 357 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 FUT5Q11128 374 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 AGERQ15109 404 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GID4Q8IVV7 300 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 PXT1Q8NFP0 134 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 OR51A7Q8NH64 312 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 C2CD4CQ8TF44 421 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ADAT1Q9BUB4 502 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 KLHL9Q9P2J3 617 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 LSM7Q9UK45 103 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 IRAK3Q9Y616 596 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GALR3O60755 368 aaPredicted RBP10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ATG12O94817 140 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 HIST1H2ABP04908 130 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 BSGP35613 385 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 PSMB10P40306 273 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 ADH7P40394 386 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GPNMBQ14956 572 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 RPE65Q16518 533 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 BEX5Q5H9J7 111 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 HIST3H2AQ7L7L0 130 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 SSX6Q7RTT6 188 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 GDF7Q7Z4P5 450 aa10.72□□□□□ -0.69
HMGCS1-202ENST00000433297 HSD17B13Q7Z5P4 300 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms