RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RHOAP61586 193 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 TAP2Q03519 686 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 GANABQ14697 944 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 FAM214AQ32MH5 1076 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 C3orf36Q3SXR2 165 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 LGALSLQ3ZCW2 172 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 EOGTQ5NDL2 527 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ADGRF1Q5T601 910 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 HBMQ6B0K9 141 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 TMIGD1Q6UXZ0 262 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SLC36A4Q6YBV0 504 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 GLCCI1Q86VQ1 547 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 GPR65Q8IYL9 337 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 CARFQ8N187 725 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SYT14Q8NB59 555 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 KREMEN2Q8NCW0 462 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 GPR32P1Q8NGA4 272 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SMG7Q92540 1137 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 NR4A3Q92570 626 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 RBPMSQ93062 196 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ECHDC3Q96DC8 303 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 NEURL3Q96EH8 262 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 CCDC120Q96HB5 630 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 LRR1Q96L50 414 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF354BQ96LW1 612 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 RBP7Q96R05 134 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ABHD1Q96SE0 405 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ZSCAN5AQ9BUG6 496 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ACTR6Q9GZN1 396 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SLC5A7Q9GZV3 580 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 MED17Q9NVC6 651 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 COMMD3Q9UBI1 195 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SCP2D1Q9UJQ7 156 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 KLF2Q9Y5W3 355 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 NCOR2Q9Y618 2525 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 FANCMQ8IYD8 2048 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 A0A1B0GTQ1 180 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 MED19A0JLT2 244 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 SHISA3A0PJX4 238 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 OR6C74A6NCV1 312 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 OR6C65A6NJZ3 312 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 F8W810 466 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 SMLR1H3BR10 107 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 GABRPO00591 440 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 HYAL3O43820 417 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 OR10H3O60404 316 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CLEC3AO75596 197 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CLDN7O95471 211 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 VNN2O95498 520 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 MPC2O95563 127 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 C6orf47O95873 294 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 LALBAP00709 142 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 KLKB1P03952 638 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 IFI30P13284 250 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CD33P20138 364 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 NPR2P20594 1047 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 C4BPBP20851 252 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CPT2P23786 658 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CD40P25942 277 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 BMI1P35226 326 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CHI3L1P36222 383 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 FRKP42685 505 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 SMSP52788 366 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 RAC3P60763 192 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 PUDPQ08623 228 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF155Q12901 538 aaPredicted RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CCINQ13939 588 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 PRICKLE4Q2TBC4 344 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CYP27C1Q4G0S4 372 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 FAM69AQ5T7M9 428 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 VASNQ6EMK4 673 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 RAET1GQ6H3X3 334 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 TYW3Q6IPR3 259 aaKnown RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 PYHIN1Q6K0P9 492 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 LRFN4Q6PJG9 635 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 TFAP2EQ6VUC0 442 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 TMEM184AQ6ZMB5 413 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 TPRG1Q6ZUI0 275 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 THOC6Q86W42 341 aaKnown RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 EIF4E3Q8N5X7 224 aaKnown RBP7.49□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF321PQ8N8H1 164 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 ATAD1Q8NBU5 361 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 GPR26Q8NDV2 337 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 OR1N1Q8NGS0 311 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 NEIL3Q8TAT5 605 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 SLC7A13Q8TCU3 470 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 NECTIN4Q96NY8 510 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 REG4Q9BYZ8 158 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 PCED1AQ9H1Q7 454 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 DPAGT1Q9H3H5 408 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 LDAHQ9H6V9 325 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 GPR27Q9NS67 375 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 SOHLH2Q9NX45 425 aa7.49□□□□□ -1.21
VTI1A-202ENST00000432306 KCMF1Q9P0J7 381 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms