RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TUBBP07437 444 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 UBL4AP11441 157 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 HPGDP15428 266 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 ATP6V1C1P21283 382 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 CDKN2CP42773 168 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 CCR4P51679 360 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 SUMO3P55854 103 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 NME5P56597 212 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 WDR4P57081 412 aaKnown RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 NKX6-1P78426 367 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 BST1Q10588 318 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 GPR68Q15743 365 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 SLC25A53Q5H9E4 307 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 SAXO2Q658L1 398 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 TYW3Q6IPR3 259 aaKnown RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 TNFAIP8L2Q6P589 184 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 FRRS1Q6ZNA5 592 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 TUSC5Q8IXB3 177 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF619Q8N2I2 560 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 OR8J2Q8NGG1 315 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 OR4A15Q8NGL6 344 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 ZG16BQ96DA0 208 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 PERPQ96FX8 193 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF300Q96RE9 604 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 TMEM204Q9BSN7 226 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 NMUR2Q9GZQ4 415 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 SLC6A13Q9NSD5 602 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 KLHL13Q9P2N7 655 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 MCTS1Q9ULC4 181 aaKnown RBP10.48□□□□□ -0.73
HDAC4-202ENST00000430200 RAP2CQ9Y3L5 183 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 DTNAQ9Y4J8 743 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
HDAC4-202ENST00000430200 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SERINC4A6NH21 518 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF814B7Z6K7 855 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 RNASET2O00584 256 aaKnown RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 CASKO14936 926 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 RGS16O15492 202 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF264O43296 627 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 RAMP1O60894 148 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SYNGR4O95473 234 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 UBTFL6P0CB48 400 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 OR12D1P0DN82 309 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 MATN1P21941 496 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ME2P23368 584 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SLC1A6P48664 564 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 CTBP2P56545 445 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SELENBP1Q13228 472 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 FGFBP1Q14512 234 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 CASP8Q14790 479 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 MAPK11Q15759 364 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF141Q15928 474 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ACKR1Q16570 336 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ARHGAP11BQ3KRB8 267 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 LSM12Q3MHD2 195 aaKnown RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 TMEM176BQ3YBM2 270 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF704Q6ZNC4 412 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 MAVSQ7Z434 540 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 WFDC8Q8IUA0 241 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF527Q8NB42 609 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 OR5W2Q8NH69 310 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 LILRB1Q8NHL6 650 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 MIPOL1Q8TD10 442 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF75CPQ92670 426 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 NEUROG1Q92886 237 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 S100PBPQ96BU1 408 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 MOAP1Q96BY2 351 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 Q96MF0 132 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 CCL19Q99731 98 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 PSD2Q9BQI7 771 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SLC39A3Q9BRY0 314 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 INPP5KQ9BT40 448 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 SSU72Q9NP77 194 aaKnown RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 ZNF226Q9NYT6 803 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 PRSS50Q9UI38 385 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 RAB21Q9UL25 225 aa10.47□□□□□ -0.73
HDAC4-202ENST00000430200 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-202ENST00000430200 YLPM1P49750 1951 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 JMJD1CQ15652 2540 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 H7C1Q1 480 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 AP3D1O14617 1153 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 BIRC5O15392 142 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 DDX5P17844 614 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 PSMB1P20618 241 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 PGM1P36871 562 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 EIF1P41567 113 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 CARD18P57730 90 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 UFM1P61960 85 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 CAPRIN1Q14444 709 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 KRTAP21-3Q3LHN1 58 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 FAM174BQ3ZCQ3 159 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 TIGD2Q4W5G0 525 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 CEP85LQ5SZL2 805 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 ABLIM2Q6H8Q1 611 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 FCRLAQ7L513 359 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 CPNE4Q96A23 557 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 TESCQ96BS2 214 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms