RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 DPH1Q9BZG8 443 aa13.14□□□□□ -0.31
CALD1-207ENST00000430085 SLC26A1Q9H2B4 701 aa13.14□□□□□ -0.31
CALD1-207ENST00000430085 IL20Q9NYY1 176 aa13.14□□□□□ -0.31
CALD1-207ENST00000430085 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
CALD1-207ENST00000430085 GPN3Q9UHW5 284 aaPredicted RBP13.14□□□□□ -0.31
CALD1-207ENST00000430085 ASCC3Q8N3C0 2202 aaKnown RBP13.14□□□□□ -0.31
CALD1-207ENST00000430085 CDC42EP2O14613 210 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 PRKYO43930 277 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 GDF9O60383 454 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 KLK3P07288 261 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 STSP08842 583 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 CCL4P13236 92 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 PSMB9P28065 219 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 PSPHP78330 225 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 OCLNQ16625 522 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 MEDAGQ5VYS4 303 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 KIRREL2Q6UWL6 708 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 WDR36Q8NI36 951 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 FANK1Q8TC84 345 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 C12orf43Q96C57 262 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 OMA1Q96E52 524 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 SIGLEC11Q96RL6 698 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 C20orf141Q9NUB4 165 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 C19orf25Q9UFG5 118 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 RPL36Q9Y3U8 105 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 SPEGQ15772 3267 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 CDX4O14627 284 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 ZNF264O43296 627 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 MAN1A2O60476 641 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 ICOSLGO75144 302 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 SAGP10523 405 aaPredicted RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 MAKP20794 623 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 ABCD3P28288 659 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 PEX19P40855 299 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 CCR4P51679 360 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 GPR143P51810 404 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 TMBIM6P55061 237 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 GP2P55259 537 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 CTBP2P56545 445 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 NRG3P56975 720 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 RNF4P78317 190 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 CD226Q15762 336 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 FNDC7Q5VTL7 733 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 CYP4Z2PQ8N1L4 340 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 LRR1Q96L50 414 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 SPSB2Q99619 263 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 LPAR4Q99677 370 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 SLC39A1Q9NY26 324 aa13.13□□□□□ -0.31
CALD1-207ENST00000430085 NXT1Q9UKK6 140 aaKnown RBP13.13□□□□□ -0.31
CALD1-207ENST00000430085 TSPAN2O60636 221 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 CYC1P08574 325 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 PIPP12273 146 aaPredicted RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 TMPRSS11FQ6ZWK6 438 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 CPEB2Q7Z5Q1 589 aaKnown RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 MRGPREQ86SM8 312 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 ZNF441Q8N8Z8 693 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 OR2T33Q8NG76 320 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 TMEM163Q8TC26 289 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 SAMD8Q96LT4 415 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 CMKLR1Q99788 373 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 ULBP3Q9BZM4 244 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 SEMA4CQ9C0C4 833 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 WDR54Q9H977 334 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 CARD8Q9Y2G2 431 aa13.12□□□□□ -0.31
CALD1-207ENST00000430085 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
CALD1-207ENST00000430085 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 EFCAB9A8MZ26 197 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 H3BMQ9 156 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CNOT3O75175 753 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 RCBTB2O95199 551 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 ZNF28P17035 718 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 BMP7P18075 431 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CCKBRP32239 447 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 PNLIPRP2P54317 469 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 SKP2Q13309 424 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 SYT14P1Q58G82 188 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 SYT6Q5T7P8 510 aaPredicted RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 MRPL14Q6P1L8 145 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 APOOLQ6UXV4 268 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms