RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CFLARO15519 480 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 SCN2BO60939 215 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 H6PDO95479 791 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 PAX1P15863 534 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 PRPS1L1P21108 318 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 SOAT1P35610 550 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 SERPINB5P36952 375 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 CASP9P55211 416 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 CLDN8P56748 225 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 PHC1P78364 1004 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 SKP2Q13309 424 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 QPRTQ15274 297 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 TAB1Q15750 504 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 LSM12Q3MHD2 195 aaKnown RBP13.79□□□□□ -0.2
SEC13-210ENST00000428626 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 ZNF527Q8NB42 609 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 PPP1R36Q96LQ0 422 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 HOXD1Q9GZZ0 328 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 QRSL1Q9H0R6 528 aaKnown RBP13.79□□□□□ -0.2
SEC13-210ENST00000428626 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 ZNF701Q9NV72 531 aaPredicted RBP13.79□□□□□ -0.2
SEC13-210ENST00000428626 ATAD3AQ9NVI7 634 aa13.79□□□□□ -0.2
SEC13-210ENST00000428626 ANK3Q12955 4377 aaKnown RBP13.79□□□□□ -0.2
SEC13-210ENST00000428626 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 C9JVG2 144 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 GTPBP1O00178 669 aaKnown RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 ZNF264O43296 627 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 DNAJA2O60884 412 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 CNOT4O95628 575 aaKnown RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 DDX5P17844 614 aaKnown RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 NR1H2P55055 460 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PLAURQ03405 335 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 EMX2Q04743 252 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 IFFO1Q0D2I5 559 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 RNPS1Q15287 305 aaKnown RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 GPR68Q15743 365 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PDCD2Q16342 344 aaPredicted RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 MAPK14Q16539 360 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PGS1Q32NB8 556 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 TMEM201Q5SNT2 666 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 SFRP5Q5T4F7 317 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 GTF2IRD2BQ6EKJ0 949 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 C6orf120Q7Z4R8 191 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 GTF2IRD2Q86UP8 949 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 STK32CQ86UX6 486 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PRIMA1Q86XR5 153 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 TMCO5AQ8N6Q1 288 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 OR5W2Q8NH69 310 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEC13-210ENST00000428626 ZNF775Q96BV0 537 aaPredicted RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 MRGPRX4Q96LA9 322 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PSD2Q9BQI7 771 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
SEC13-210ENST00000428626 ASIC5Q9NY37 505 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 PRSS50Q9UI38 385 aa13.78□□□□□ -0.2
SEC13-210ENST00000428626 WDR91A4D1P6 747 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 H3BNH8 94 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 SMAD9O15198 467 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 EIF4E2O60573 245 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 UGT2B17O75795 530 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 PRKD3O94806 890 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 ADAP00813 363 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 YES1P07947 543 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 KRT16P08779 473 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 PABPC4LP0CB38 370 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 UBL4AP11441 157 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 MATN1P21941 496 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 CCR4P51679 360 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 FUT5Q11128 374 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 SELENBP1Q13228 472 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 ZNF141Q15928 474 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 TIGD2Q4W5G0 525 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 NATD1Q8N6N6 113 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 STEAP2Q8NFT2 490 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 ZNF75CPQ92670 426 aaPredicted RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 MOAP1Q96BY2 351 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 REXO5Q96IC2 774 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 PRPF18Q99633 342 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 THUMPD3Q9BV44 507 aaKnown RBP13.77□□□□□ -0.21
SEC13-210ENST00000428626 NMUR2Q9GZQ4 415 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 BCO1Q9HAY6 547 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 TIGARQ9NQ88 270 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 MKLN1Q9UL63 735 aa13.77□□□□□ -0.21
SEC13-210ENST00000428626 PLCE1Q9P212 2302 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 RNF103-CHMP3A0A140T963 221 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ANKRD28O15084 1053 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 SOD3P08294 240 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 PCSK6P29122 969 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 SESN3P58005 492 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms