RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CBLN3Q6UW01 205 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 CASP12Q6UXS9 341 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 PRSS48Q7RTY5 328 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 MEX3DQ86XN8 651 aaKnown RBP13.93□□□□□ -0.18
ACTB-204ENST00000425660 GALNT6Q8NCL4 622 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 OR5L2Q8NGL0 311 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 OR8D4Q8NGM9 314 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 PFN4Q8NHR9 129 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 TEX47Q8TBZ9 253 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 PHOSPHO1Q8TCT1 267 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 OSTF1Q92882 214 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 FGF11Q92914 225 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 BPIFA2Q96DR5 249 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 TAAR9Q96RI9 348 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 RTN4RQ9BZR6 473 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 PCDHGA3Q9Y5H0 932 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 NPFFR2Q9Y5X5 522 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 OTOGLQ3ZCN5 2332 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 A0A087WUJ7 227 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 TEX51A0A1B0GUA7 166 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 FADS1O60427 444 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 FAM20BO75063 409 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 NAGAP17050 411 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 TGM1P22735 817 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 COPZ1P61923 177 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PIGFQ07326 219 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 EIF3IQ13347 325 aaKnown RBP13.92□□□□□ -0.18
ACTB-204ENST00000425660 PMS2P3Q13401 168 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PCOLCEQ15113 449 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 GTF2IRD2BQ6EKJ0 949 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 ACSM5Q6NUN0 579 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 GLRX5Q86SX6 157 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 GTF2IRD2Q86UP8 949 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 LAT2Q9GZY6 243 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 SNX5Q9Y5X3 404 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 CEPT1Q9Y6K0 416 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 CDH10Q9Y6N8 788 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 ADAM10O14672 748 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 OIP5O43482 229 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 RGS10O43665 173 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PPM1BO75688 479 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 ZFAND5O76080 213 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 DLGAP3O95886 979 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 IFI30P13284 250 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 MAKP20794 623 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PCYT1AP49585 367 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 RAB39AQ14964 217 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 WBP2NLQ6ICG8 309 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 GPR141Q7Z602 305 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 CADM2Q8N3J6 435 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 FAM26EQ8N5C1 309 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 IQCF1Q8N6M8 205 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 BRIX1Q8TDN6 353 aaKnown RBP13.92□□□□□ -0.18
ACTB-204ENST00000425660 ELP5Q8TE02 316 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 C3orf49Q96BT1 292 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 Q96MT0 163 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 SLC19A3Q9BZV2 496 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 ZNF700Q9H0M5 742 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 LIN28AQ9H9Z2 209 aaKnown RBP13.92□□□□□ -0.18
ACTB-204ENST00000425660 ATP13A2Q9NQ11 1180 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 ERVK-18Q9QC07 812 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 RPS6KB2Q9UBS0 482 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 CARD8Q9Y2G2 431 aa13.92□□□□□ -0.18
ACTB-204ENST00000425660 PTRH2Q9Y3E5 179 aaKnown RBP13.92□□□□□ -0.18
ACTB-204ENST00000425660 IGHV1-45A0A0A0MS14 117 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 GTPBP1O00178 669 aaKnown RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 EIF4E2O60573 245 aaKnown RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 ZNF354AO60765 605 aaPredicted RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 CSO75390 466 aaKnown RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 NADKO95544 446 aaPredicted RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 MT-CO3P00414 261 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 IGF2P01344 180 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 EVI2BP34910 448 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 SLC15A1P46059 708 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 SLC6A8P48029 635 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 EMX1Q04741 257 aaPredicted RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 EFR3AQ14156 821 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 NEDD8Q15843 81 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 OCLNQ16625 522 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 FAM69BQ5VUD6 431 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 RPL13AP3Q6NVV1 102 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 CDK20Q8IZL9 346 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 OR13F1Q8NGS4 319 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 RNF138Q8WVD3 245 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 IMMP1LQ96LU5 166 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 DPH1Q9BZG8 443 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 CLN6Q9NWW5 311 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 CNOT2Q9NZN8 540 aaKnown RBP13.91□□□□□ -0.18
ACTB-204ENST00000425660 SELENONQ9NZV5 590 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 MYOTQ9UBF9 498 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 PADI1Q9ULC6 663 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms