RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CIB1Q99828 191 aa12.23□□□□□ -0.45
PRPF39-202ENST00000424478 CEACAM4O75871 244 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PRSS23O95084 383 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 KCNC4Q03721 635 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 EIPR1Q53HC9 387 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 FAM71CQ8NEG0 241 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 TRIM45Q9H8W5 580 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 NMNAT1Q9HAN9 279 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 A0A1B0GWA3 101 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SP1P08047 785 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 UMPSP11172 480 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PEPDP12955 493 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 POU2F1P14859 743 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 MAGEA2P43356 314 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 EPS8Q12929 822 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 QPRTQ15274 297 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SEC23BQ15437 767 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 ZNF766Q5HY98 468 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 RNFT1Q5M7Z0 435 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 OTUD3Q5T2D3 398 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PQLC1Q8N2U9 271 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 TMEM255BQ8WV15 326 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 NRG4Q8WWG1 115 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SGCZQ96LD1 299 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 ANGPTL4Q9BY76 406 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 MAN2C1Q9NTJ4 1040 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 RIMS3Q9UJD0 308 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SLC35A3Q9Y2D2 325 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 FAM32AQ9Y421 112 aaKnown RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SYT5O00445 386 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 CLOCKO15516 846 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PEX1O43933 1283 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PIP5K1CO60331 668 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 FUT1P19526 365 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PEX2P28328 305 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 CLK3P49761 638 aaKnown RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 LINC00303Q3SY05 128 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 OR2M7Q8NG81 312 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 OR4K17Q8NGC6 315 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 OR9Q2Q8NGE9 314 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 PHF10Q8WUB8 498 aaKnown RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 TIMMDC1Q9NPL8 285 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 AGPAT4Q9NRZ5 378 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 OAZ3Q9UMX2 235 aa12.22□□□□□ -0.45
PRPF39-202ENST00000424478 SAMHD1Q9Y3Z3 626 aaKnown RBP12.22□□□□□ -0.45
PRPF39-202ENST00000424478 LRRN3E7EW58 273 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 E2F6O75461 281 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 TRAPPC6AO75865 159 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 CBLP22681 906 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 FASP25445 335 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 MEOX1P50221 254 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 NADK2Q4G0N4 442 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 AP1ARQ63HQ0 302 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 OR2T5Q6IEZ7 315 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 PAPD5Q8NDF8 572 aaKnown RBP12.21□□□□□ -0.45
PRPF39-202ENST00000424478 OR2M3Q8NG83 312 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 OR1J4Q8NGS1 313 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 OR2T29Q8NH02 315 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 RNF138Q8WVD3 245 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 HAS2Q92819 552 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 CFAP46Q8IYW2 2715 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 ALPK2Q86TB3 2170 aa12.21□□□□□ -0.45
PRPF39-202ENST00000424478 A0A1W2PQD3 144 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 NGFRP08138 427 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF23P17027 643 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 FOXO1Q12778 655 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 TRIP10Q15642 601 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 SLC25A25Q6KCM7 469 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 GPR119Q8TDV5 335 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 SLC41A3Q96GZ6 507 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.46
PRPF39-202ENST00000424478 PIP5K1AQ99755 562 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 ARHGAP9Q9BRR9 750 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 LAT2Q9GZY6 243 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 ACER3Q9NUN7 267 aa12.21□□□□□ -0.46
PRPF39-202ENST00000424478 LDLRP01130 860 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 MAGEA5P43359 124 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 P2RX1P51575 399 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 FOXF1Q12946 379 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ALG10BQ5I7T1 473 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 C1QL3Q5VWW1 255 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 RANBP3LQ86VV4 465 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 PLCZ1Q86YW0 608 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 OR5W2Q8NH69 310 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ARMC7Q9H6L4 198 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms