RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 OLR1P78380 273 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 NRG1Q02297 640 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SLC34A1Q06495 639 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 C3AR1Q16581 482 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SOWAHAQ2M3V2 549 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CTSL3PQ5NE16 218 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GPR139Q6DWJ6 353 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 C3orf33Q6P1S2 294 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GDPD3Q7L5L3 318 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 RDH10Q8IZV5 341 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF420Q8TAQ5 688 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PNPT1Q8TCS8 783 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 RSC1A1Q92681 617 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TLCD1Q96CP7 247 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 APIPQ96GX9 242 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SENP5Q96HI0 755 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SLC25A51Q9H1U9 297 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 DKK4Q9UBT3 224 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CBLCQ9ULV8 474 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PLAGL1Q9UM63 463 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 BTBD3Q9Y2F9 522 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CRYM-AS1A6NIL9 109 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 LGALS16A8MUM7 142 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 RNF223E7ERA6 249 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PIRO00625 290 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 RGS10O43665 173 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CBR3O75828 277 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GPIP06744 558 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CAPN1P07384 714 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PIRTP0C851 137 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 OR5H8P0DN80 308 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PRG2P13727 222 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF44P15621 663 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 VHLP40337 213 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 WNT3AP56704 352 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GMFBP60983 142 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SLC35A2P78381 396 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MVKQ03426 396 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GALNT1Q10472 559 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 OCLNQ16625 522 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 C6orf52Q5T4I8 152 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TTC33Q6PID6 262 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SH2D5Q6ZV89 423 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 KANSL1Q7Z3B3 1105 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ST13P4Q8IZP2 240 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GCNT2Q8N0V5 402 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CRYBG2Q8N1P7 616 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF283Q8N7M2 679 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ST8SIA4Q92187 359 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MOAP1Q96BY2 351 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ORAI3Q9BRQ5 295 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM120AQ9BXJ8 343 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 DPEP3Q9H4B8 488 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MYOTQ9UBF9 498 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 AP3M1Q9Y2T2 418 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SETD2Q9BYW2 2564 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CXorf51AA0A1B0GTR3 108 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ANKRD63C9JTQ0 380 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MT-CO1P00395 513 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ESR1P03372 595 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CRHP06850 196 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CHRM5P08912 532 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 IL7RP16871 459 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 NELFEP18615 380 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 DNAJB1P25685 340 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 HSD3B2P26439 372 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PEX2P28328 305 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ARFIP1P53367 373 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 HADHBP55084 474 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PPP3R1P63098 170 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ELF3P78545 371 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TSTQ16762 297 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PLEKHS1Q5SXH7 462 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 C9orf135Q5VTT2 229 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SAXO2Q658L1 398 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 DENND1BQ6P3S1 775 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 YRDCQ86U90 279 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 BEST3Q8N1M1 668 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MORN4Q8NDC4 146 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 ISOC1Q96CN7 298 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PGAP3Q96FM1 320 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MED30Q96HR3 178 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MAELQ96JY0 434 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 POTEKPQ9BYX7 375 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PRSS22Q9GZN4 317 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 UNKLQ9H9P5 680 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM248Q9NWD8 314 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TEX10Q9NXF1 929 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MKLN1Q9UL63 735 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 AUP1Q9Y679 476 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SDK2Q58EX2 2172 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 HEATR5AQ86XA9 2040 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SVILO95425 2214 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 A0A087WZY1 265 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SIGLEC16A6NMB1 481 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 M0QX08 132 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MATN3O15232 486 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 VNN2O95498 520 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PTBP3O95758 552 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms