RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SVOPLQ8N434 492 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 EIF4E3Q8N5X7 224 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 YIPF7Q8N8F6 280 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 C12orf29Q8N999 325 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 PAPD5Q8NDF8 572 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CHDHQ8NE62 594 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM83FQ8NEG4 500 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR4M1Q8NGD0 313 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR6M1Q8NGM8 313 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 PHOSPHO2Q8TCD6 241 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF431Q8TF32 576 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 LRRC15Q8TF66 581 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CANT1Q8WVQ1 401 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 PXDNQ92626 1479 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 NSMAFQ92636 917 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 GTF3AQ92664 365 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 RIT1Q92963 219 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC38A4Q969I6 547 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CPNE4Q96A23 557 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 BIRC7Q96CA5 298 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 LGALS12Q96DT0 336 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 PGAP3Q96FM1 320 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 MUS81Q96NY9 551 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR5M11Q96RB7 305 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 DDOQ99489 341 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 HOPXQ9BPY8 73 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 RBM4BQ9BQ04 359 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 APOL2Q9BQE5 337 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 LXNQ9BS40 222 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF577Q9BSK1 485 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 TBCDQ9BTW9 1192 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 MED18Q9BUE0 208 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 RBM4Q9BWF3 364 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 FTHL17Q9BXU8 183 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 UGT2B28Q9BY64 529 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 GSDMCQ9BYG8 508 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 BCL2L14Q9BZR8 327 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZYG11BQ9C0D3 744 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CCDC90BQ9GZT6 254 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 HRH4Q9H3N8 390 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 C11orf49Q9H6J7 331 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 OPA3Q9H6K4 179 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 FOLH1BQ9HBA9 442 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 EXD2Q9NVH0 621 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 IMPAD1Q9NX62 359 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 BABAM2Q9NXR7 383 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 DPP3Q9NY33 737 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 BARHL2Q9NY43 387 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 TAS2R14Q9NYV8 317 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 KLHL9Q9P2J3 617 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 DNAJB9Q9UBS3 223 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 MORF4L1Q9UBU8 362 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CTSFQ9UBX1 484 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 CD300AQ9UGN4 299 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 NUFIP1Q9UHK0 495 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 TMEM2Q9UHN6 1383 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 NARFQ9UHQ1 456 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ADAM28Q9UKQ2 775 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 TBC1D24Q9ULP9 559 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 STUB1Q9UNE7 303 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 SNX6Q9UNH7 406 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 AURKCQ9UQB9 309 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ERVW-1Q9UQF0 538 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ERVK-19Q9WJR5 959 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 RUVBL2Q9Y230 463 aaKnown RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 MTF2Q9Y483 593 aaPredicted RBP3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 ORC6Q9Y5N6 252 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 AP1M2Q9Y6Q5 423 aa3.06□□□□□ -1.92
SDCBPP3-201ENST00000419629 TAF1P21675 1872 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 KIDINS220Q9ULH0 1771 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TJP1Q07157 1748 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PKD1L3Q7Z443 1732 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TOGARAM1Q9Y4F4 1720 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CICQ96RK0 1608 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PTPRJQ12913 1337 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 IGKV3D-15A0A087WSY6 115 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 A0A1B0GVI7 797 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PRORSD1PA6NEY8 169 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MFSD2BA6NFX1 497 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM159BA6NKW6 160 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ARHGEF33A8MVX0 844 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 J3QR06 171 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 UBXN8O00124 270 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 SULT1C2O00338 296 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CYB561D2O14569 222 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PHYHO14832 338 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PLPP2O43688 288 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 AIREO43918 545 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 GPR137BO60478 399 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 HCN1O60741 890 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MITFO75030 526 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 VPS26AO75436 327 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 STX11O75558 287 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 LYPLA1O75608 230 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR2C1O95371 312 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 LIPFP07098 398 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 H1F0P07305 194 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms