RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 IGHV5-10-1A0A0J9YXX1 117 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 EFCAB9A8MZ26 197 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CCRL2O00421 344 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 AIREO43918 545 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 TSPAN2O60636 221 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 HCN1O60741 890 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 RFPL3O75679 317 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CSTAP01040 98 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 IGHA1P01876 353 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 HBQ1P09105 142 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CKMT1AP12532 417 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ALAS2P22557 587 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 HTR1FP30939 366 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 MTNR1AP48039 350 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC9A3P48764 834 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ENTPD1P49961 510 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 GPR143P51810 404 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 VBP1P61758 197 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CCL7P80098 99 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 OCA2Q04671 838 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SKP2Q13309 424 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SPHARQ15513 63 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SSX1Q16384 188 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 DGUOKQ16854 277 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF829Q3KNS6 432 aaPredicted RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ALG10BQ5I7T1 473 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 PRAMEF17Q5VTA0 474 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SMARCD3Q6STE5 483 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 GDPGP1Q6ZNW5 385 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 USP43Q70EL4 1123 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 BCDIN3DQ7Z5W3 292 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 BMP8AQ7Z5Y6 402 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 GID4Q8IVV7 300 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 C1orf210Q8IVY1 113 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 C9orf40Q8IXQ3 194 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CDK20Q8IZL9 346 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF321PQ8N8H1 164 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF527Q8NB42 609 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF485Q8NCK3 441 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 KBTBD8Q8NFY9 601 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 OR52L1Q8NGH7 329 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 OR1N1Q8NGS0 311 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 LIPHQ8WWY8 451 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 BORCS5Q969J3 196 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 C3orf49Q96BT1 292 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 HSPBAP1Q96EW2 488 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SH3GL3Q99963 347 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SEMA4CQ9C0C4 833 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 SLIRPQ9GZT3 109 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 C12orf10Q9HB07 376 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 ATP13A2Q9NQ11 1180 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 AKIP1Q9NQ31 210 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 HINT3Q9NQE9 182 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 FBXO8Q9NRD0 319 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CMC2Q9NRP2 79 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 NDUFB11Q9NX14 153 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 MRTO4Q9UKD2 239 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 PPIEQ9UNP9 301 aaKnown RBP8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 CLCA3PQ9Y6N3 262 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
LINCMD1-201ENST00000418518 C2orf92A0A1B0GVN3 265 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 A8MU76 341 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 J3QRE1 110 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 M0R3G1 203 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 PPM1BO75688 479 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 UTS2O95399 124 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CER1O95813 267 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 NR4A1P22736 598 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 RFX3P48380 749 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SERPINB10P48595 397 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CDH11P55287 796 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 RPS4XP62701 263 aaKnown RBP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CSTF1Q05048 431 aaKnown RBP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 ACSM1Q08AH1 577 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 TRA2AQ13595 282 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 NNATQ16517 81 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 TSTQ16762 297 aaKnown RBP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 ISXQ2M1V0 245 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 VWA2Q5GFL6 755 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 CLEC12AQ5QGZ9 265 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 WBP2NLQ6ICG8 309 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 NIPAL3Q6P499 406 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 HSDL2Q6YN16 418 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 THSD4Q6ZMP0 1018 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 NUP54Q7Z3B4 507 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SLCO6A1Q86UG4 719 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC34A3Q8N130 599 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF614Q8N883 585 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 OR13C2Q8NGS9 318 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 GRHL3Q8TE85 626 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 PIGKQ92643 395 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 ZHX1-C8orf76Q96EF9 292 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 RNFT2Q96EX2 444 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 PLEKHA8Q96JA3 519 aa8.31□□□□□ -1.08
LINCMD1-201ENST00000418518 LMF1Q96S06 567 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms