RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TBCELQ5QJ74 424 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 HEPHL1Q6MZM0 1159 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 YRDCQ86U90 279 aaKnown RBP16.16■□□□□ 0.18
VCP-202ENST00000417448 RETREG3Q86VR2 466 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 DUSP19Q8WTR2 217 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 RNF138Q8WVD3 245 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 TMEM41AQ96HV5 264 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 WFIKKN1Q96NZ8 548 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 SFXN3Q9BWM7 321 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 DSN1Q9H410 356 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 KLHL28Q9NXS3 571 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 SLC25A37Q9NYZ2 338 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 MKLN1Q9UL63 735 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
VCP-202ENST00000417448 CENPVL1A0A0U1RR11 272 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 GMNCA6NCL1 334 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 A8MXE2 369 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 HMGN4O00479 90 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 SNPHO15079 494 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 OIP5O43482 229 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 SOX30O94993 753 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 KRT16P08779 473 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 HOXB9P17482 250 aaPredicted RBP16.15■□□□□ 0.18
VCP-202ENST00000417448 LOXP28300 417 aaPredicted RBP16.15■□□□□ 0.18
VCP-202ENST00000417448 KHKP50053 298 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 MVDP53602 400 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 PSMD4P55036 377 aaKnown RBP16.15■□□□□ 0.18
VCP-202ENST00000417448 KLF10Q13118 480 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 TNK1Q13470 666 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 GPR68Q15743 365 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 SYPL1Q16563 259 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.15■□□□□ 0.18
VCP-202ENST00000417448 WIPI1Q5MNZ9 446 aaPredicted RBP16.15■□□□□ 0.18
VCP-202ENST00000417448 METTL21CQ5VZV1 264 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 C20orf204Q6ZNR8 217 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 MSANTD1Q6ZTZ1 278 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 C16orf62Q7Z3J2 963 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 SPATA21Q7Z572 469 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 LSRQ86X29 649 aaPredicted RBP16.15■□□□□ 0.18
VCP-202ENST00000417448 TRIML2Q8N7C3 387 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 ANKFN1Q8N957 763 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 TBL1XR1Q9BZK7 514 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 NMUR2Q9GZQ4 415 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 TPT1P8Q9HAU6 139 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 PPP4R1LQ9P1A2 415 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 NDRG3Q9UGV2 375 aa16.15■□□□□ 0.18
VCP-202ENST00000417448 A0A096LPI6 279 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 A0A1W2PP18 115 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 FBP2O00757 339 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 PHF1O43189 567 aaPredicted RBP16.14■□□□□ 0.17
VCP-202ENST00000417448 ANGPTL1O95841 491 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 NUDT7P0C024 238 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 ZCCHC18P0CG32 403 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 ATP6V1C1P21283 382 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 CPOXP36551 454 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 CRATP43155 626 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 PSPHP78330 225 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 LRRC74AQ0VAA2 488 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 SNTA1Q13424 505 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 CD226Q15762 336 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 NDUFAF6Q330K2 333 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 ARHGAP11BQ3KRB8 267 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 GPAT3Q53EU6 434 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 TMEM81Q6P7N7 255 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 PLCZ1Q86YW0 608 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 GCNT2Q8N0V5 402 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 C10orf111Q8N326 155 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 ZNF614Q8N883 585 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 MIPOL1Q8TD10 442 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 ROPN1LQ96C74 230 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 INTS12Q96CB8 462 aaKnown RBP16.14■□□□□ 0.17
VCP-202ENST00000417448 ZG16BQ96DA0 208 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 SH3YL1Q96HL8 342 aaPredicted RBP16.14■□□□□ 0.17
VCP-202ENST00000417448 VAPAQ9P0L0 249 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 KCNE5Q9UJ90 142 aa16.14■□□□□ 0.17
VCP-202ENST00000417448 LOC100653049A0A140TA62 436 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 CLIC1O00299 241 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 KRT34O76011 436 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 RCBTB2O95199 551 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 KRT75O95678 551 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 IFNA2P01563 188 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 PAX1P15863 534 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 TBXA2RP21731 343 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 CRYGSP22914 178 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 FAM27E3Q08E93 113 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 DLEU7Q6UYE1 221 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 HIPK1Q86Z02 1210 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 POU5F2Q8N7G0 328 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 OR4K17Q8NGC6 315 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 OR5M1Q8NGP8 315 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 ZPLD1Q8TCW7 415 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
VCP-202ENST00000417448 TUBA1CQ9BQE3 449 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 G6PC3Q9BUM1 346 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 QRSL1Q9H0R6 528 aaKnown RBP16.13■□□□□ 0.17
VCP-202ENST00000417448 IKZF5Q9H5V7 419 aa16.13■□□□□ 0.17
VCP-202ENST00000417448 RYDENQ9NUL5 291 aaKnown RBP16.13■□□□□ 0.17
VCP-202ENST00000417448 SVEP1Q4LDE5 3571 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms