RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF141Q15928 474 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 SLC25A53Q5H9E4 307 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 NUFIP2Q7Z417 695 aaKnown RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 ZNF527Q8NB42 609 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 RFWD2Q8NHY2 731 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 MIPOL1Q8TD10 442 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 OSTF1Q92882 214 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 PRRG4Q9BZD6 226 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 KLHL4Q9C0H6 718 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 NMUR2Q9GZQ4 415 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 QRSL1Q9H0R6 528 aaKnown RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 GSX1Q9H4S2 264 aaPredicted RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 C12orf49Q9H741 205 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 KCNK9Q9NPC2 374 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 MKLN1Q9UL63 735 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 MCTS1Q9ULC4 181 aaKnown RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 EMC9Q9Y3B6 208 aa13.47□□□□□ -0.25
UBXN4-203ENST00000416538 GPC6Q9Y625 555 aaPredicted RBP13.47□□□□□ -0.25
UBXN4-203ENST00000416538 IGHV3-15A0A0B4J1V0 119 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 TMEM120BA0PK00 339 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ZNF264O43296 627 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ADAM11O75078 769 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 SYNGR4O95473 234 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 CPSF4O95639 269 aaKnown RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 PLGP00747 810 aaPredicted RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 TUBBP07437 444 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 OR12D1P0DN82 309 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 LBPP18428 481 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ME2P23368 584 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 EDNRAP25101 427 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 HOXC12P31275 282 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 EIF1P41567 113 aaKnown RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 CTBP2P56545 445 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 UFM1P61960 85 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 STX3Q13277 289 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ARHGAP11BQ3KRB8 267 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 DMRTA1Q5VZB9 504 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 TYW3Q6IPR3 259 aaKnown RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 OGFOD2Q6N063 350 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 TFAP2EQ6VUC0 442 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 FRRS1Q6ZNA5 592 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 FAM71CQ8NEG0 241 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ATP6V1C2Q8NEY4 427 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 OR5W2Q8NH69 310 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 ZFP90Q8TF47 636 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 HOXD1Q9GZZ0 328 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
UBXN4-203ENST00000416538 PAQR5Q9NXK6 330 aaPredicted RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 MARCOQ9UEW3 520 aaPredicted RBP13.46□□□□□ -0.25
UBXN4-203ENST00000416538 NSD1Q96L73 2696 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 E9PBE3 544 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 CASKO14936 926 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 KLF4O43474 513 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 STX11O75558 287 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 GCM2O75603 506 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 ENPP1P22413 925 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 ADH6P28332 368 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 CDKN2CP42773 168 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 CARD18P57730 90 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 SELENBP1Q13228 472 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 TSC22D1Q15714 1073 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 TMEM176BQ3YBM2 270 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 ZG16BQ96DA0 208 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 NEURL3Q96EH8 262 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 MRGPRX4Q96LA9 322 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 INPP5KQ9BT40 448 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 WDR55Q9H6Y2 383 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 UBTD1Q9HAC8 227 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 SLC6A13Q9NSD5 602 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF226Q9NYT6 803 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 KLHL13Q9P2N7 655 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 STOML1Q9UBI4 398 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 FN1P02751 2386 aaKnown RBP13.45□□□□□ -0.26
UBXN4-203ENST00000416538 TLN2Q9Y4G6 2542 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 PLCE1Q9P212 2302 aa13.45□□□□□ -0.26
UBXN4-203ENST00000416538 GOLGA8QA0A0J9YX86 632 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 PRSS51A0A1B0GVH4 220 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 GOLGA8OA6NCC3 632 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 GOLGA8NF8WBI6 632 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 H3BNH8 94 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 GTPBP1O00178 669 aaKnown RBP13.44□□□□□ -0.26
UBXN4-203ENST00000416538 SMAD9O15198 467 aaKnown RBP13.44□□□□□ -0.26
UBXN4-203ENST00000416538 EIF4E2O60573 245 aaKnown RBP13.44□□□□□ -0.26
UBXN4-203ENST00000416538 AK1P00568 194 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 PLAUP00749 431 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 UQCRC2P22695 453 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 EPHA3P29320 983 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms