RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 LAT2Q9GZY6 243 aa15.7■□□□□ 0.1
PDLIM2-208ENST00000416159 CENPHQ9H3R5 247 aa15.7■□□□□ 0.1
PDLIM2-208ENST00000416159 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
PDLIM2-208ENST00000416159 GP6Q9HCN6 339 aa15.7■□□□□ 0.1
PDLIM2-208ENST00000416159 RAB21Q9UL25 225 aa15.7■□□□□ 0.1
PDLIM2-208ENST00000416159 DSCAMO60469 2012 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 ETV2O00321 342 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 SMPD2O60906 423 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 SCN2BO60939 215 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 PRKD3O94806 890 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 NTN1O95631 604 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 CPSF4O95639 269 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 THBDP07204 575 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 UQCRC2P22695 453 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 LOXP28300 417 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 CCR4P51679 360 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 CLNS1AP54105 237 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 QPRTQ15274 297 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 DPY19L1Q2PZI1 675 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 C20orf204Q6ZNR8 217 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 FCRLAQ7L513 359 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 C16orf62Q7Z3J2 963 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 CLEC4FQ8N1N0 589 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 SLC43A2Q8N370 569 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 TMCO5AQ8N6Q1 288 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 ATP6V1C2Q8NEY4 427 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 ZFP90Q8TF47 636 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 OIT3Q8WWZ8 545 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 SRXN1Q9BYN0 137 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 OR51I1Q9H343 314 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 C12orf49Q9H741 205 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 COQ10BQ9H8M1 238 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 UBTD1Q9HAC8 227 aa15.69■□□□□ 0.1
PDLIM2-208ENST00000416159 ESPNB1AK53 854 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 KLF4O43474 513 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 FCMRO60667 390 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 GUSBP08236 651 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 PSMB1P20618 241 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 SLC7A1P30825 629 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 PHC1P78364 1004 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 MPP2Q14168 576 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ATAD3BQ5T9A4 648 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 HEPHL1Q6MZM0 1159 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 P3H2Q8IVL5 708 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 TUSC5Q8IXB3 177 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ABHD3Q8WU67 409 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 XAGE5Q8WWM1 108 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 HS3ST6Q96QI5 342 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 TACO1Q9BSH4 297 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 THUMPD3Q9BV44 507 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 HDHD5Q9BXW7 423 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 NUF2Q9BZD4 464 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ACTR6Q9GZN1 396 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ZNF350Q9GZX5 532 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 MEAF6Q9HAF1 191 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 POLE3Q9NRF9 147 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 KLHL13Q9P2N7 655 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 MKLN1Q9UL63 735 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ROS1P08922 2347 aa15.68■□□□□ 0.1
PDLIM2-208ENST00000416159 ANKRD28O15084 1053 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 DNAJA2O60884 412 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 UGT2B17O75795 530 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 CYP7B1O75881 506 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 CSTAP01040 98 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 YES1P07947 543 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 OR12D1P0DN82 309 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 S100A3P33764 101 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 NR1H2P55055 460 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 RAC3P60763 192 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 SKP2Q13309 424 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 CASP8Q14790 479 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 AP1ARQ63HQ0 302 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 SAXO2Q658L1 398 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 EIF3MQ7L2H7 374 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 BIVMQ86UB2 503 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 ANKRD46Q86W74 232 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 KRTAP1-3Q8IUG1 177 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 STEAP2Q8NFT2 490 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 TMEM234Q8WY98 164 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 ST8SIA1Q92185 356 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 ZNF524Q96C55 264 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 CCL19Q99731 98 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 GSX1Q9H4S2 264 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 SERINC1Q9NRX5 453 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 PNPOQ9NVS9 261 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 KCNE5Q9UJ90 142 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 FREM1Q5H8C1 2179 aa15.67■□□□□ 0.1
PDLIM2-208ENST00000416159 PRR14LQ5THK1 2151 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 PGCP20142 388 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 CASP9P55211 416 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 BST1Q10588 318 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 KRTAP21-3Q3LHN1 58 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 TIGD2Q4W5G0 525 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 SPANXN4Q5MJ08 99 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 HHATQ5VTY9 493 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 OGFOD2Q6N063 350 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 C3orf33Q6P1S2 294 aa15.66■□□□□ 0.1
PDLIM2-208ENST00000416159 TNFAIP8L2Q6P589 184 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms