RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TSTD3H0UI37 97 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 H3BNC9 293 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 CRTAPO75718 401 aaPredicted RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 SOD1P00441 154 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 MBP02144 154 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 RD3LP0DJH9 198 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 HOXB2P14652 356 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ACRV1P26436 265 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 TRHRP34981 398 aaPredicted RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 KIR3DL1P43629 444 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 CCR6P51684 374 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ACY1Q03154 408 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 BIKQ13323 160 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 DYRK1AQ13627 763 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ELAVL3Q14576 367 aaKnown RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 ZNF234Q14588 700 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 DUOXA1Q1HG43 343 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ZC3H14Q6PJT7 736 aaKnown RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 HSD11B1LQ7Z5J1 315 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 KLHDC8BQ8IXV7 354 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ZNF683Q8IZ20 524 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 OR52B6Q8NGF0 335 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 OR6K3Q8NGY3 331 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 GNPDA2Q8TDQ7 276 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 NUDT8Q8WV74 236 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ACOT11Q8WXI4 607 aaPredicted RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 C7orf34Q96L11 122 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 VRK1Q99986 396 aaPredicted RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 PDFQ9HBH1 243 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 DZANK1Q9NVP4 752 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 ASIC5Q9NY37 505 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 KLHL42Q9P2K6 505 aa7.32□□□□□ -1.24
SIK3-203ENST00000415541 TDRD15B5MCY1 1934 aaKnown RBP7.32□□□□□ -1.24
SIK3-203ENST00000415541 LRIT2A6NDA9 550 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CACNB4O00305 520 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 VEGFDO43915 354 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 KCNK5O95279 499 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CLDN9O95484 217 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 RECKO95980 971 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CPN1P15169 458 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ACTR1BP42025 376 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ASMTP46597 345 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ABRAXAS2Q15018 415 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 USF2Q15853 346 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 TMEM201Q5SNT2 666 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TMEM91Q6ZNR0 172 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TRIM46Q7Z4K8 759 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 OAFQ86UD1 273 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CMIPQ8IY22 773 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 NAGSQ8N159 534 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 OR10H5Q8NGA6 315 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 INPP5KQ9BT40 448 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 SARGQ9BW04 601 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TOLLIPQ9H0E2 274 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CAPN10Q9HC96 672 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 MIEF1Q9NQG6 463 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 PRSS21Q9Y6M0 314 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 IGLON5A6NGN9 336 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 PSMD9O00233 223 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 GAAP10253 952 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 COX7A2P14406 83 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 PSMB1P20618 241 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 AGTR1P30556 359 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CHI3L1P36222 383 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 SRP9P49458 86 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 ZP1P60852 638 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 UBE2IP63279 158 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 POU4F2Q12837 409 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 OCLNQ16625 522 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ZNF660Q6AZW8 331 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 HBMQ6B0K9 141 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 RAB12Q6IQ22 244 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TMIGD1Q6UXZ0 262 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ERN2Q76MJ5 926 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 SSX6Q7RTT6 188 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 MAMDC2Q7Z304 686 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 AMZ2Q86W34 360 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 SMAP2Q8WU79 429 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 GLYATL1Q969I3 302 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ZFP3Q96NJ6 502 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 EBPLQ9BY08 206 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 POLDIP3Q9BY77 421 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 SGK2Q9HBY8 427 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TREM1Q9NP99 234 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 FZD3Q9NPG1 666 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 DUSP22Q9NRW4 184 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 RLIMQ9NVW2 624 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ZNF225Q9UK10 706 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 CBLCQ9ULV8 474 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 KCNK6Q9Y257 313 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 ZDBF2Q9HCK1 2354 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TP53BP1Q12888 1972 aaPredicted RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 PDCD11Q14690 1871 aaKnown RBP7.31□□□□□ -1.24
SIK3-203ENST00000415541 A0A0D9SG52 128 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 TMEM129A0AVI4 362 aa7.31□□□□□ -1.24
SIK3-203ENST00000415541 FAM221BA6H8Z2 402 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms