RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 VIPR2P41587 438 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CCR6P51684 374 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 RGS1Q08116 209 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 POU4F2Q12837 409 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 IRF4Q15306 451 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SLC25A35Q3KQZ1 300 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SLC36A2Q495M3 483 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CD276Q5ZPR3 534 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 BAIAP2L2Q6UXY1 529 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ESPNLQ6ZVH7 1005 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 TMEM99Q8N816 258 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SPERTQ8NA61 448 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OR7G2Q8NG99 324 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OR4K14Q8NGD5 310 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 TMEM239Q8WW34 195 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 KISS1RQ969F8 398 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 C7orf50Q9BRJ6 194 aaKnown RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 ZCCHC4Q9H5U6 513 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SATB2Q9UPW6 733 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 COLEC10Q9Y6Z7 277 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SCN3AQ9NY46 2000 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 TBC1D3EA0A087X179 549 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 TRAV1-2A0A0B4J238 106 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ANKRD61A6NGH8 418 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 FZD7O75084 574 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SERPINA3P01011 423 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CEACAM5P06731 702 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CD3GP09693 182 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ANKRD34CP0C6C1 535 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 STOMP27105 288 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 PEBP1P30086 187 aaKnown RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 SOX9P48436 509 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 MMP15P51511 669 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 AP2S1P53680 142 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 NRG3P56975 720 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 FXYD6P3P58550 94 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 E2F1Q01094 437 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 FOXK2Q01167 660 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 PDGFRLQ15198 375 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 LTB4RQ15722 352 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 NTRK2Q16620 822 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 GARNL3Q5VVW2 1013 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ZCCHC12Q6PEW1 402 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 FAM111BQ6SJ93 734 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 USP53Q70EK8 1073 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 KRT74Q7RTS7 529 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CEACAM19Q7Z692 300 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ZNF687Q8N1G0 1237 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ZNF619Q8N2I2 560 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SLC44A3Q8N4M1 653 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SAMD12Q8N8I0 201 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OR4D9Q8NGE8 314 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OR13C5Q8NGS8 318 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SP7Q8TDD2 431 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 PTP4A1Q93096 173 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 MARVELD3Q96A59 401 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OMA1Q96E52 524 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 CMTM3Q96MX0 182 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 OR2M2Q96R28 347 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SERINC2Q96SA4 455 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ORAI3Q9BRQ5 295 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 DPCDQ9BVM2 203 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 DPH1Q9BZG8 443 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ZNF350Q9GZX5 532 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 SYNPO2LQ9H987 977 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 ABRACLQ9P1F3 81 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 KCNK6Q9Y257 313 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 RASD1Q9Y272 281 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 A0A0G2JK05 382 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 RPS10-NUDT3A0A1W2PQS6 291 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 BTN3A3O00478 584 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 LYPD3O95274 346 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 ADH1BP00325 375 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 PDGFAP04085 211 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 IFI6P09912 130 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SBK2P0C263 348 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SMIM10L1P0DMW3 83 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 MAKP20794 623 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 C5AR1P21730 350 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TLX1P31314 330 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 CTNNB1P35222 781 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 ACTC1P68032 377 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 ACTA1P68133 377 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 OR1Q1Q15612 314 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 CST6Q15828 149 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 LGALSLQ3ZCW2 172 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 DMKNQ6E0U4 476 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 RPTNQ6XPR3 784 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 PAQR7Q86WK9 346 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 NACC2Q96BF6 587 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 SMIM10Q96HG1 83 aa9.07□□□□□ -0.96
CD44-206ENST00000415148 RSPH9Q9H1X1 276 aaPredicted RBP9.07□□□□□ -0.96
CD44-206ENST00000415148 C6orf106Q9H6K1 298 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms