RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
LINC00887-202ENST00000414120 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
LINC00887-202ENST00000414120 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
LINC00887-202ENST00000414120 ACSS2Q9NR19 701 aa12.93□□□□□ -0.34
LINC00887-202ENST00000414120 NDUFB11Q9NX14 153 aa12.93□□□□□ -0.34
LINC00887-202ENST00000414120 SMAD9O15198 467 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 MOSPD3O75425 235 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SIX3O95343 332 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 OR2T7P0C7T2 308 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 TBPP20226 339 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 EPHA8P29322 1005 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 GPR4P46093 362 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 CSRP3P50461 194 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 EIF5AL1Q6IS14 154 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 IL34Q6ZMJ4 242 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 OR4C6Q8NH72 309 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 DNAJB14Q8TBM8 379 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 MRPS31Q92665 395 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ADGRG7Q96K78 797 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ADAT1Q9BUB4 502 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ABCG5Q9H222 651 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PRDM12Q9H4Q4 367 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ACTR8Q9H981 624 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PLSCR4Q9NRQ2 329 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 FBXO34Q9NWN3 711 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 OPN4Q9UHM6 478 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ELOA3DA6NLF2 546 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 TGOLN2O43493 480 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PMP2P02689 132 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 VTNP04004 478 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ZNF35P13682 527 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ZNF37AP17032 561 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PSEN2P49810 448 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 RPS26P62854 115 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 HNRNPA0Q13151 305 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 FIGNL1Q6PIW4 674 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 CYP4Z1Q86W10 505 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 PLD6Q8N2A8 252 aaKnown RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 GRHL3Q8TE85 626 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SMIM12Q96EX1 92 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SMARCD1Q96GM5 515 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 RNF2Q99496 336 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 JAM3Q9BX67 310 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 GABARAPL3Q9BY60 117 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SPRTNQ9H040 489 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 POLR3FQ9H1D9 316 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SMOC1Q9H4F8 434 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 ZDHHC3Q9NYG2 299 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 SAE1Q9UBE0 346 aaPredicted RBP12.92□□□□□ -0.34
LINC00887-202ENST00000414120 FBXL4Q9UKA2 621 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 Q9Y3F1 56 aa12.92□□□□□ -0.34
LINC00887-202ENST00000414120 A0A096LPK6 155 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 C22orf46C9J442 243 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 IFNA21P01568 189 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PIPP12273 146 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 CLINT1Q14677 625 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PRAMEF8Q5VWM4 474 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PRAMEF7Q5VXH5 474 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 RNLSQ5VYX0 342 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PARGQ86W56 976 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 M1APQ8TC57 530 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 TMEM184CQ9NVA4 438 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 LRFN1Q9P244 771 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 LEF1Q9UJU2 399 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 A0A0A6YYH2 397 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 A6NJ64 397 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 IRAK2O43187 625 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 KDELR3O43731 214 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 RGS9O75916 674 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 TOXO94900 526 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 GLCEO94923 617 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 CYB5R3P00387 301 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 SSTR4P31391 388 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 SLC6A4P31645 630 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 BDKRB1P46663 353 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
LINC00887-202ENST00000414120 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 CNTN4Q8IWV2 1026 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 RPLP0P6Q8NHW5 317 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 PCDH19Q8TAB3 1148 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 ADAMTS18Q8TE60 1221 aa12.91□□□□□ -0.34
LINC00887-202ENST00000414120 ARL11Q969Q4 196 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms