RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CARD16Q5EG05 197 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 OR2T5Q6IEZ7 315 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 RFLNAQ6ZTI6 216 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 GLT6D1Q7Z4J2 308 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 PRSS42Q7Z5A4 293 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 RNF130Q86XS8 419 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 FAM90A1Q86YD7 464 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 RDH10Q8IZV5 341 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 OR4K2Q8NGD2 314 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 OR2T29Q8NH02 315 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 C9orf43Q8TAL5 461 aaPredicted RBP8.73□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF675Q8TD23 568 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 PIH1D2Q8WWB5 315 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 RAB1CQ92928 201 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 KLHL15Q96M94 604 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 INPP5KQ9BT40 448 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 TMEM245Q9H330 911 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 ERVK13-1Q9NX77 482 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 GFOD1Q9NXC2 390 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 NUFIP1Q9UHK0 495 aaKnown RBP8.73□□□□□ -1.01
SNHG3-201ENST00000413987 SAMD4AQ9UPU9 718 aaKnown RBP8.73□□□□□ -1.01
SNHG3-201ENST00000413987 SLC27A6Q9Y2P4 619 aa8.73□□□□□ -1.01
SNHG3-201ENST00000413987 MUC22E2RYF6 1773 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FAM171A2A8MVW0 826 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 LEUTXA8MZ59 168 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 VIPP01282 170 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 C1QBP02746 253 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FGF1P05230 155 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 CDK1P06493 297 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF37AP17032 561 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 TNNI3P19429 210 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 MYL9P24844 172 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 TNFSF8P32971 234 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 HMGCLP35914 325 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RGS6P49758 472 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PPP1R8Q12972 351 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SLAMF1Q13291 335 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 EIF4HQ15056 248 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR4D1Q15615 310 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SMN1Q16637 294 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FAM219BQ5XKK7 198 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 NCR3LG1Q68D85 454 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 LETMD1Q6P1Q0 360 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SLC44A3Q8N4M1 653 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ASB15Q8WXK1 588 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 WDR89Q96FK6 387 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FYTTD1Q96QD9 318 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SEMA4CQ9C0C4 833 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SLC6A17Q9H1V8 727 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 NARFLQ9H6Q4 476 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 VAPAQ9P0L0 249 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PRR23AA6NEV1 266 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 EFCAB10A6NFE3 127 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 MROH6A6NGR9 719 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PAGE4O60829 102 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR2B3O76000 313 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR7A10O76100 309 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 CLDN7O95471 211 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SERPINA1P01009 418 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 GSTM1P09488 218 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FTH1P19P0C7X4 201 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 CSNK1EP49674 416 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RAB25P57735 213 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 AP1S1P61966 158 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 MAD2L1Q13257 205 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PDE7AQ13946 482 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 SSX2Q16385 188 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RUNDC3AQ59EK9 446 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 TMPRSS11AQ6ZMR5 421 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 GPRIN3Q6ZVF9 776 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF367Q7RTV3 350 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 C1orf210Q8IVY1 113 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR4K14Q8NGD5 310 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR2T11Q8NH01 316 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PTPMT1Q8WUK0 201 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 NUDT8Q8WV74 236 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ITCHQ96J02 903 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 Q96MT0 163 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 EGFL8Q99944 293 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RHNO1Q9BSD3 238 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 GTPBP2Q9BX10 602 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 PRRG3Q9BZD7 231 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 DERL2Q9GZP9 239 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 OR51E2Q9H255 320 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 UBQLN3Q9H347 655 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RIMS4Q9H426 269 aaPredicted RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 FAM83DQ9H4H8 585 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 MED20Q9H944 212 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ING3Q9NXR8 418 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 EIF3KQ9UBQ5 218 aaKnown RBP8.72□□□□□ -1.01
SNHG3-201ENST00000413987 UTS2RQ9UKP6 389 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 RCE1Q9Y256 329 aa8.72□□□□□ -1.01
SNHG3-201ENST00000413987 ENTPD2Q9Y5L3 495 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms