RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 WDR53Q7Z5U6 358 aaPredicted RBP15.76■□□□□ 0.11
PTPRC-206ENST00000413409 GALNT12Q8IXK2 581 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 TRUB1Q8WWH5 349 aaKnown RBP15.76■□□□□ 0.11
PTPRC-206ENST00000413409 UBE2FQ969M7 185 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 TGM7Q96PF1 710 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 LMF2Q9BU23 707 aaKnown RBP15.76■□□□□ 0.11
PTPRC-206ENST00000413409 SLC24A3Q9HC58 644 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 ACOT13Q9NPJ3 140 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
PTPRC-206ENST00000413409 SIDT1Q9NXL6 827 aaKnown RBP15.76■□□□□ 0.11
PTPRC-206ENST00000413409 PCDHGA9Q9Y5G4 932 aaKnown RBP15.76■□□□□ 0.11
PTPRC-206ENST00000413409 EFCAB10A6NFE3 127 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 TTC36A6NLP5 189 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 H0YIG0 161 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 FMO6PO60774 539 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 CYP7B1O75881 506 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 INMTO95050 263 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 GABARAPO95166 117 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 TP53P04637 393 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 CDK1P06493 297 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 PIPP12273 146 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 MMP11P24347 488 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 GALNSP34059 522 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 POU6F2P78424 691 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 BIKQ13323 160 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 GRM7Q14831 915 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 SP5Q6BEB4 398 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 PLEKHM3Q6ZWE6 761 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 MED25Q71SY5 747 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 HMGN2P46Q86SG4 172 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 SIMC1Q8NDZ2 872 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 GNPDA2Q8TDQ7 276 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 ULBP3Q9BZM4 244 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 NAA50Q9GZZ1 169 aaKnown RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 SLC25A19Q9HC21 320 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 PRTFDC1Q9NRG1 225 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 CLN6Q9NWW5 311 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 HCN3Q9P1Z3 774 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 SEMA5BQ9P283 1151 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 WARS2Q9UGM6 360 aaKnown RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 MKLN1Q9UL63 735 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 GPR55Q9Y2T6 319 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 MN1Q10571 1320 aaPredicted RBP15.75■□□□□ 0.11
PTPRC-206ENST00000413409 SPG11Q96JI7 2443 aa15.75■□□□□ 0.11
PTPRC-206ENST00000413409 IGHV5-51A0A0C4DH38 117 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 CLDN4O14493 209 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 FADS2O95864 444 aaKnown RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 NID1P14543 1247 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 ST13P50502 369 aaKnown RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 CCL11P51671 97 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 EXOSC7Q15024 291 aaKnown RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 DECR1Q16698 335 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 WDR74Q6RFH5 385 aaPredicted RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 SLC16A12Q6ZSM3 486 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 PTCHD4Q6ZW05 846 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 ZER1Q7Z7L7 766 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 RANBP3LQ86VV4 465 aaPredicted RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 OR52R1Q8NGF1 315 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 ACOT11Q8WXI4 607 aaPredicted RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 GGHQ92820 318 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 ZG16BQ96DA0 208 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 YIPF6Q96EC8 236 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 Q96MT0 163 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 MCHR1Q99705 422 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 RHNO1Q9BSD3 238 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 FUNDC2Q9BWH2 189 aa15.74■□□□□ 0.11
PTPRC-206ENST00000413409 LIN28AQ9H9Z2 209 aaKnown RBP15.74■□□□□ 0.11
PTPRC-206ENST00000413409 TPST2O60704 377 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 S1PR1P21453 382 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 POU1F1P28069 291 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 MAP2K4P45985 399 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 STT3AP46977 705 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 HSD17B7P56937 341 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 TSPAN31Q12999 210 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 ZNHIT3Q15649 155 aaPredicted RBP15.73■□□□□ 0.11
PTPRC-206ENST00000413409 ZSWIM7Q19AV6 140 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 SLC6A19Q695T7 634 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 PRSS42Q7Z5A4 293 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 CLIP4Q8N3C7 705 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 RBMXL3Q8N7X1 1067 aaKnown RBP15.73■□□□□ 0.11
PTPRC-206ENST00000413409 PIGXQ8TBF5 258 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 GPR151Q8TDV0 419 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 SNRNP40Q96DI7 357 aaKnown RBP15.73■□□□□ 0.11
PTPRC-206ENST00000413409 MVB12AQ96EY5 273 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 PEX11GQ96HA9 241 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 AHCYL2Q96HN2 611 aaKnown RBP15.73■□□□□ 0.11
PTPRC-206ENST00000413409 ARMC7Q9H6L4 198 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 FOLH1BQ9HBA9 442 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 C14orf105Q9NVL8 296 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 ASF1BQ9NVP2 202 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 KLHL3Q9UH77 587 aa15.73■□□□□ 0.11
PTPRC-206ENST00000413409 A0A087WUU8 490 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 A0A1W2PPW3 197 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 CPSF4LA6NMK7 179 aaKnown RBP15.72■□□□□ 0.11
PTPRC-206ENST00000413409 H3BN98 237 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 TGFBR3LH3BV60 316 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 FRS3O43559 492 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 PRAMEF2O60811 474 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 SOX14O95416 240 aa15.72■□□□□ 0.11
PTPRC-206ENST00000413409 FPR3P25089 353 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms