RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 CLHC1Q8NHS4 586 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 NDNFQ8TB73 568 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 CD300LFQ8TDQ1 290 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 PAQR8Q8TEZ7 354 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 AENQ8WTP8 325 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 NUS1Q96E22 293 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SERAC1Q96JX3 654 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ARL5BQ96KC2 179 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF354BQ96LW1 612 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 MBOAT4Q96T53 435 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 LLPHQ9BRT6 129 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 GPR174Q9BXC1 333 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 OR2AG1Q9H205 316 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 GAL3ST2Q9H3Q3 398 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 BICC1Q9H694 974 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 Q9HAA7 133 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF556Q9HAH1 456 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 NMRAL1Q9HBL8 299 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 POPDC2Q9HBU9 364 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 LYARQ9NX58 379 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 RCOR3Q9P2K3 495 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 GMPPBQ9Y5P6 360 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 AKNAQ7Z591 1439 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 WDR81Q562E7 1941 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 IGHV4-61A0A0C4DH41 118 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 OR6C65A6NJZ3 312 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF195O14628 629 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 TM9SF1O15321 606 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 RGS16O15492 202 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 LATO43561 262 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 FGF17O60258 216 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CABYRO75952 493 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 PDE5AO76074 875 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 TSHBP01222 138 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 JCHAINP01591 159 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 IGHV4-59P01825 116 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 RPLP0P05388 317 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 PAX1P15863 534 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF10P21506 573 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 STOMP27105 288 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 HMOX2P30519 316 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 LCN1P31025 176 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CD80P33681 288 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 HTR2BP41595 481 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 EMDP50402 254 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 PEX3P56589 373 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 TPM4P67936 248 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 RPL36AP83881 106 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CDK16Q00536 496 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ZFP36L1Q07352 338 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 VGLL4Q14135 290 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 RCAN2Q14206 197 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ANGPT1Q15389 498 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 VPS26BQ4G0F5 336 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 UNC50Q53HI1 259 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 TECRLQ5HYJ1 363 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 WSCD1Q658N2 575 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CATSPERDQ86XM0 798 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ERO1BQ86YB8 467 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 MMAAQ8IVH4 418 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 MFSD6LQ8IWD5 586 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 DHRSXQ8N5I4 330 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 LINC00469Q8N7U9 141 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 C9orf106Q8NAJ2 232 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 OR4A15Q8NGL6 344 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 KIFAP3Q92845 792 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CIDECQ96AQ7 238 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ASB9Q96DX5 294 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ZBED3Q96IU2 234 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 CATSPER2Q96P56 530 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 BBS2Q9BXC9 721 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 SLITRK2Q9H156 845 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 SMYD3Q9H7B4 428 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 INPP5EQ9NRR6 644 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 MAN2C1Q9NTJ4 1040 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 TAS2R16Q9NYV7 291 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 AK6Q9Y3D8 172 aaKnown RBP3.83□□□□□ -1.8
BRCA1-204ENST00000412061 PEX16Q9Y5Y5 336 aa3.83□□□□□ -1.8
BRCA1-204ENST00000412061 GRIN2DO15399 1336 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 A0A1W2PPV9 198 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 SMCO2A6NFE2 343 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 F5H6K3 240 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 SURF4O15260 269 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 TMEM50AO95807 157 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 EDN1P05305 212 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 CT62P0C5K7 136 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 BCKDHAP12694 445 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 HPGDP15428 266 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF3P17036 446 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 EDNRAP25101 427 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 GPR183P32249 361 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 RORAP35398 523 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 DCTP40126 519 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 RFX3P48380 749 aa3.82□□□□□ -1.8
BRCA1-204ENST00000412061 STK19P49842 368 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms