RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SASH3O75995 380 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 EPXP11678 715 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 PEX19P40855 299 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 DAZAP2Q15038 168 aaPredicted RBP17.06■□□□□ 0.32
SF3A1-202ENST00000411423 SLC25A53Q5H9E4 307 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 HBMQ6B0K9 141 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ESPNLQ6ZVH7 1005 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 KIF18BQ86Y91 864 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 TMCO5AQ8N6Q1 288 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ATP6V1C2Q8NEY4 427 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ZFP90Q8TF47 636 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ROBO4Q8WZ75 1007 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 OSTF1Q92882 214 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 LAT2Q9GZY6 243 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 SLC38A1Q9H2H9 487 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ZIM2Q9NZV7 527 aa17.06■□□□□ 0.32
SF3A1-202ENST00000411423 ANKHD1Q8IWZ3 2542 aaKnown RBP17.06■□□□□ 0.32
SF3A1-202ENST00000411423 A0A1W2PPR1 153 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 UBDO15205 165 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 H6PDO95479 791 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 GUSBP08236 651 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 KLK2P20151 261 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 ELK4P28324 431 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 DNAJA1P31689 397 aaKnown RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 EIF1P41567 113 aaKnown RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 IDH3AP50213 366 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 CCR4P51679 360 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 GSTA3Q16772 222 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 GPAT3Q53EU6 434 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 C22orf34Q6ZV56 151 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 FAM214BQ7L5A3 538 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 CDC20BQ86Y33 519 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 ZNF619Q8N2I2 560 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 GLB1L3Q8NCI6 653 aaPredicted RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 TOR1AIP2Q8NFQ8 470 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 VPS33AQ96AX1 596 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 ZBTB18Q99592 522 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 POLDIP3Q9BY77 421 aaKnown RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 CLEC4MQ9H2X3 399 aaPredicted RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 GPC6Q9Y625 555 aaPredicted RBP17.05■□□□□ 0.32
SF3A1-202ENST00000411423 MPDZO75970 2070 aa17.05■□□□□ 0.32
SF3A1-202ENST00000411423 A0A1W2PNR3 127 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 RFXANKO14593 260 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 SS18L1O75177 396 aaPredicted RBP17.04■□□□□ 0.32
SF3A1-202ENST00000411423 AGR2O95994 175 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 CSTAP01040 98 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 IL6P05231 212 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 CD8BP10966 210 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 ADH6P28332 368 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 EEF1A1P68104 462 aaKnown RBP17.04■□□□□ 0.32
SF3A1-202ENST00000411423 CBFBQ13951 182 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 ZNF239Q16600 458 aaKnown RBP17.04■□□□□ 0.32
SF3A1-202ENST00000411423 TMEM176BQ3YBM2 270 aaPredicted RBP17.04■□□□□ 0.32
SF3A1-202ENST00000411423 TIGD2Q4W5G0 525 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 ATAD3BQ5T9A4 648 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 EEF1A1P5Q5VTE0 462 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 LRRC8CQ8TDW0 803 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
SF3A1-202ENST00000411423 MRGPRX4Q96LA9 322 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 POLE3Q9NRF9 147 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 TESMINQ9Y4I5 508 aa17.04■□□□□ 0.32
SF3A1-202ENST00000411423 SH3D21A4FU49 640 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 SIAH2O43255 324 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
SF3A1-202ENST00000411423 ME2P23368 584 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 CD79BP40259 229 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 POLR2JP52435 117 aaKnown RBP17.03■□□□□ 0.32
SF3A1-202ENST00000411423 CARD18P57730 90 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 SESN3P58005 492 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 SLC2A7Q6PXP3 512 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 HDXQ7Z353 690 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 ABHD3Q8WU67 409 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 WFIKKN1Q96NZ8 548 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 PRRG4Q9BZD6 226 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 STOML1Q9UBI4 398 aa17.03■□□□□ 0.32
SF3A1-202ENST00000411423 ANKRD17O75179 2603 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 IGHV3-15A0A0B4J1V0 119 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 AP3D1O14617 1153 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 SYNGR4O95473 234 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 FCGR2AP12318 317 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 ETFAP13804 333 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 RPS4Y1P22090 263 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 POU4F3Q15319 338 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 EIF3MQ7L2H7 374 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 ZNF550Q7Z398 422 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 MIER2Q8N344 545 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 RNF128Q8TEB7 428 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 CNOT9Q92600 299 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 GTF2H4Q92759 462 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 GMPPAQ96IJ6 420 aaPredicted RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 DACH2Q96NX9 599 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 TRNT1Q96Q11 434 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
SF3A1-202ENST00000411423 SLC52A3Q9NQ40 469 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 PLSCR4Q9NRQ2 329 aa17.02■□□□□ 0.32
SF3A1-202ENST00000411423 PAQR5Q9NXK6 330 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms