RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ICOSLGO75144 302 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SEC24DO94855 1032 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 IGHEP01854 428 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TFAP2AP05549 437 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 UBL4AP11441 157 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 COX6A1P12074 109 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 POU2F1P14859 743 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 FPR3P25089 353 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 IFNGR2P38484 337 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RBM34P42696 430 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 LIMK1P53667 647 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PLCXD2Q0VAA5 305 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TSPAN31Q12999 210 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TARDBPQ13148 414 aaKnown RBP eCLIP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PTGES3Q15185 160 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TRIP6Q15654 476 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CD226Q15762 336 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 MEP1AQ16819 746 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 STPG1Q5TH74 334 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SLX4IPQ5VYV7 408 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 C12orf73Q69YU5 71 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 FIP1L1Q6UN15 594 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 APOOLQ6UXV4 268 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 Q6ZPB1 254 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CLDN22Q8N7P3 220 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TSPAN14Q8NG11 270 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM255BQ8WV15 326 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 MED30Q96HR3 178 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 IMMP1LQ96LU5 166 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CCNL2Q96S94 520 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NRSN2Q9GZP1 204 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ING2Q9H160 280 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CRNNQ9UBG3 495 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SPEGQ15772 3267 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 A0A1B0GWA3 101 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 DPPA5A6NC42 116 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SLC1A7O00341 560 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SCDO00767 359 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TERTO14746 1132 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PLD2O14939 933 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 FADS1O60427 444 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 WBP4O75554 376 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PPM1BO75688 479 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 OR6B1O95007 311 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NTN1O95631 604 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CSTAP01040 98 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NAGAP17050 411 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 IL12BP29460 328 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RNF144AP50876 292 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CTBP2P56545 445 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CLDN6P56747 220 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PRKCDQ05655 676 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 HES3Q5TGS1 186 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 LYPD8Q6UX82 237 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 C6orf15Q6UXA7 325 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF730Q6ZMV8 503 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RASSF6Q6ZTQ3 369 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TIPARPQ7Z3E1 657 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 MRGPREQ86SM8 312 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 KIF18BQ86Y91 864 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 AMER2Q8N7J2 671 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF614Q8N883 585 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PIGXQ8TBF5 258 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 HGDQ93099 445 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 FAM117AQ9C073 453 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM27Q9HBJ8 222 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SLC25A19Q9HC21 320 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RYDENQ9NUL5 291 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF226Q9NYT6 803 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RNF6Q9Y252 685 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 HS3ST3B1Q9Y662 390 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 MPDZO75970 2070 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 EML6Q6ZMW3 1958 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 A0A087WXM4 84 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TRBV11-1A0A0K0K1C0 115 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CDC14CA4D256 554 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 SOCS6O14544 535 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF264O43296 627 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 OIP5O43482 229 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NDUFB5O43674 189 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PIP5K1CO60331 668 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF354AO60765 605 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CLPTM1O96005 669 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 FOLR3P41439 243 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ALDH3B2P48448 385 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NRG3P56975 720 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 B2MP61769 119 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CDK5Q00535 292 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 IL5RAQ01344 420 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 EFR3AQ14156 821 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 KIRREL2Q6UWL6 708 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 DHRS13Q6UX07 377 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PRR22Q8IZ63 422 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 DEPDC4Q8N2C3 294 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ARMC10Q8N2F6 343 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 OR5L2Q8NGL0 311 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RHOXF1Q8NHV9 184 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 CNIH3Q8TBE1 160 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms