RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 FGF20Q9NP95 211 aaPredicted RBP19.05■□□□□ 0.64
USP39-203ENST00000409470 MKKSQ9NPJ1 570 aaPredicted RBP19.05■□□□□ 0.64
USP39-203ENST00000409470 UBQLN4Q9NRR5 601 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SLC35A3Q9Y2D2 325 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 IGKV3-11P04433 115 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 TBXA2RP21731 343 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SOX3P41225 446 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 EFNA3P52797 238 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 GAS1P54826 345 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 FXYD6P3P58550 94 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 COPZ1P61923 177 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 CCL7P80098 99 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SSX1Q16384 188 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 KLHL26Q53HC5 615 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SOWAHCQ53LP3 525 aaPredicted RBP19.05■□□□□ 0.64
USP39-203ENST00000409470 SMARCD3Q6STE5 483 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 GATSQ8NAP1 163 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 KBTBD8Q8NFY9 601 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 DAZLQ92904 295 aaKnown RBP19.05■□□□□ 0.64
USP39-203ENST00000409470 VMP1Q96GC9 406 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 LCORQ96JN0 433 aaPredicted RBP19.05■□□□□ 0.64
USP39-203ENST00000409470 CENPOQ9BU64 300 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 TAPBPLQ9BX59 468 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SRPK3Q9UPE1 567 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 PMF1-BGLAPU3KQ54 211 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 MYO15AQ9UKN7 3530 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 TRAV27A0A087WT01 109 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 LY6G6EA0A0G2JKS1 128 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.04■□□□□ 0.64
USP39-203ENST00000409470 GNB5O14775 395 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 HCN1O60741 890 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 IL33O95760 270 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 HBQ1P09105 142 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.04■□□□□ 0.64
USP39-203ENST00000409470 SHFQ7M4L6 423 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 LAPTM4BQ86VI4 370 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 ATCAYQ86WG3 371 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 OR51A7Q8NH64 312 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 SH3YL1Q96HL8 342 aaPredicted RBP19.04■□□□□ 0.64
USP39-203ENST00000409470 ZNF426Q9BUY5 554 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 IFT27Q9BW83 186 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 NUDT9Q9BW91 350 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 VN1R1Q9GZP7 353 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 ENKD1Q9H0I2 346 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 RNF167Q9H6Y7 350 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 GAREM1Q9H706 876 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 MRTO4Q9UKD2 239 aaKnown RBP19.04■□□□□ 0.64
USP39-203ENST00000409470 SIGLEC7Q9Y286 467 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 U3KQA8 63 aa19.04■□□□□ 0.64
USP39-203ENST00000409470 C2orf92A0A1B0GVN3 265 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 FRG2CA6NGY1 282 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 SCDO00767 359 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 BHLHE40O14503 412 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 RPS3AP61247 264 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 ACY1Q03154 408 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 CRYZQ08257 329 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 SLC35F1Q5T1Q4 408 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 NXNL2Q5VZ03 156 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 C16orf87Q6PH81 154 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 C19orf48Q6RUI8 117 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 CXXC5Q7LFL8 322 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 CPOQ8IVL8 374 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 SLITRK4Q8IW52 837 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 ZNF440Q8IYI8 595 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 BBS1Q8NFJ9 593 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 OR14A16Q8NHC5 309 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 ART5Q96L15 291 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 SLIRPQ9GZT3 109 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 HINT3Q9NQE9 182 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 CTSFQ9UBX1 484 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 NUP210LQ5VU65 1888 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 TNRC6BQ9UPQ9 1833 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 COL6A3P12111 3177 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 FAM183AA6NL82 134 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 J3QRK9 145 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 NGFRP08138 427 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 GPR143P51810 404 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 MLLT11Q13015 90 aaPredicted RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 SQSTM1Q13501 440 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 HLA-DQA1Q5Y7H0 255 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 THSD4Q6ZMP0 1018 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 LINC00299Q6ZSB3 139 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 OAFQ86UD1 273 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 EID2Q8N6I1 236 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 OR9Q1Q8NGQ5 310 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 PHOSPHO1Q8TCT1 267 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 COPS7AQ9UBW8 275 aa19.03■□□□□ 0.64
USP39-203ENST00000409470 EXOSC1Q9Y3B2 195 aaKnown RBP19.03■□□□□ 0.64
USP39-203ENST00000409470 ADAMTS20P59510 1910 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 A0A1W2PQM1 296 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 FAM86C2PA6NEL3 165 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 UTS2O95399 124 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 HTR1FP30939 366 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 PLBD1Q6P4A8 553 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 LINC00114Q6XXX2 140 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 PRR22Q8IZ63 422 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 LNX2Q8N448 690 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 MCFD2Q8NI22 146 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 DNAJA4Q8WW22 397 aaPredicted RBP19.02■□□□□ 0.64
USP39-203ENST00000409470 ADIPOR1Q96A54 375 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms