RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PGBD2Q6P3X8 592 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 FAM111BQ6SJ93 734 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 Q6ZTK2 550 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 TPRG1Q6ZUI0 275 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SCN4BQ8IWT1 228 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 PUSL1Q8N0Z8 303 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 HJURPQ8NCD3 748 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 APIPQ96GX9 242 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 LRR1Q96L50 414 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF285Q96NJ3 590 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC22A12Q96S37 553 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 TSNAXQ99598 290 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF649Q9BS31 505 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MED17Q9NVC6 651 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MIOXQ9UGB7 285 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 OPN4Q9UHM6 478 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 HS3ST4Q9Y661 456 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 MYO16Q9Y6X6 1858 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 ATG2BQ96BY7 2078 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 OTOGLQ3ZCN5 2332 aa9.91□□□□□ -0.82
NIF3L1-204ENST00000409357 A0A1B0GWJ7 208 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 DRGXA6NNA5 263 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC38A8A6NNN8 435 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 LRRTM2O43300 516 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TLX2O43763 284 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CLN5O75503 358 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TOXO94900 526 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 B3GALT4O96024 378 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CRYBA1P05813 215 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SYPP08247 313 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 ANXA5P08758 320 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 ZNF806P0C7X5 589 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SFTPCP11686 197 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 PTAFRP25105 342 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 AGTR1P30556 359 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CCR7P32248 378 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 ATP5C1P36542 298 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 RAB4BP61018 213 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 EEF1A1P68104 462 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CACNG1Q06432 222 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 LBHQ53QV2 105 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 GPRC6AQ5T6X5 926 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CPTPQ5TA50 214 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 EEF1A1P5Q5VTE0 462 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 LYPLAL1Q5VWZ2 237 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SLC6A19Q695T7 634 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 OR7E24Q6IFN5 339 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SFXN4Q6P4A7 337 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 GLT6D1Q7Z4J2 308 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CLECL1Q8IZS7 167 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SAMD12Q8N8I0 201 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 THEM6Q8WUY1 208 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 EDARADDQ8WWZ3 215 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 MTFMTQ96DP5 389 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 MGME1Q9BQP7 344 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TRMT61BQ9BVS5 477 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 SORBS1Q9BX66 1292 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 ARL6Q9H0F7 186 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 ALX4Q9H161 411 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 CDCP1Q9H5V8 836 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 OPA3Q9H6K4 179 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TEX10Q9NXF1 929 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 NLGN3Q9NZ94 848 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TREM2Q9NZC2 230 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 NTMQ9P121 344 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 MRTO4Q9UKD2 239 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-204ENST00000409357 TRAV1-2A0A0B4J238 106 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 A0A0G2JK05 382 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 TRBV4-1A0A0J9YWV2 114 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 A0A1W2PRQ8 180 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 MEX3AA1L020 520 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 GSAPA4D1B5 854 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 C2orf78A6NCI8 922 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PRR23D1E9PI22 279 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 J3KTA2 159 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 FFAR1O14842 300 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 C1QCP02747 245 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 H1F0P07305 194 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PRSS56P0CW18 603 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PRR23D2P0DMB1 279 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 LAMP1P11279 417 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 MC4RP32245 332 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 RPL3P39023 403 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PTGFRP43088 359 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 OR1E2P47887 323 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PGDP52209 483 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PTPN5P54829 565 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 SEMG2Q02383 582 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 NFATC2Q13469 925 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms