RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 CCT8L1PA6NM43 557 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 C17orf51A8MQB3 221 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 VSTM5A8MXK1 200 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 TRIM49D1C9J1S8 452 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 NDUFS8O00217 210 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZNF195O14628 629 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 RGS14O43566 566 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 LYZL6O75951 148 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 NKX2-2O95096 273 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 CHEK2O96017 543 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ERCC1P07992 297 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 SNRPAP09012 282 aaKnown RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 IMPDH1P20839 514 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ENPP1P22413 925 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ATP5F1P24539 256 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 CASQ1P31415 396 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 RPL3P39023 403 aaKnown RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 OR3A2P47893 321 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PDLIM4P50479 330 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 RAC3P60763 192 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 CSNK2A1P68400 391 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 POU6F2P78424 691 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 CKAP4Q07065 602 aaKnown RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 SELENBP1Q13228 472 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 TP53BP2Q13625 1128 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 TSC22D1Q15714 1073 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PGGHGQ32M88 737 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 TMEM176BQ3YBM2 270 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 CFAP157Q5JU67 520 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZNF678Q5SXM1 525 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 C1QTNF12Q5T7M4 302 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 OR7E24Q6IFN5 339 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 C8orf74Q6P047 294 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 DNM1P46Q6ZS02 220 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 NUFIP2Q7Z417 695 aaKnown RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 GALNT5Q7Z7M9 940 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZNF540Q8NDQ6 660 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ATP6V1C2Q8NEY4 427 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 OR10H5Q8NGA6 315 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 LILRB1Q8NHL6 650 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZFP90Q8TF47 636 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 DCAKDQ8WVC6 231 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PIK3R3Q92569 461 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 NEUROG1Q92886 237 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PPCDCQ96CD2 204 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PAFAH2Q99487 392 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 KCNS3Q9BQ31 491 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 PIMREGQ9BSJ6 248 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 TRMOQ9BU70 441 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 MYOZ1Q9NP98 299 aaPredicted RBP6.86□□□□□ -1.31
LSM5-202ENST00000409292 MID1IP1Q9NPA3 183 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ZNF180Q9UJW8 692 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 ATP23Q9Y6H3 246 aa6.86□□□□□ -1.31
LSM5-202ENST00000409292 A0A087WUV0 522 aaPredicted RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 LOC100289279A0A1B0GTE1 492 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 GXYLT2A0PJZ3 443 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 HMX2A2RU54 273 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 OR5H1A6NKK0 313 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 B4DXG7 233 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 H7C417 338 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 PPP6CO00743 305 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 GPR171O14626 319 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 GSC2O15499 205 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 KIAA0513O60268 411 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 GPRIN2O60269 458 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 NDUFS7O75251 213 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 SEC22BO75396 215 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 RSL1D1O76021 490 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 ALX3O95076 343 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 PSMG1O95456 288 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 APEHP13798 732 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 CHN1P15882 459 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 PCMT1P22061 227 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 SRP14P37108 136 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 MAGEA12P43365 314 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 P2RX1P51575 399 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 EFNA4P52798 201 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 RAE1P78406 368 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 TGFBR3Q03167 851 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 CHRNEQ04844 493 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 RASGEF1BQ0VAM2 473 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 FOXF1Q12946 379 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 SCGB2A2Q13296 93 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 KRTAP24-1Q3LI83 254 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 SPDYE7PQ495Y7 208 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 IQCCQ4KMZ1 466 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 UNC50Q53HI1 259 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 FAM71E1Q6IPT2 247 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 NOXRED1Q6NXP6 359 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 KLHL24Q6TFL4 600 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 UGT2A3Q6UWM9 527 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 APOOLQ6UXV4 268 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 Q6ZSR9 355 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 RPS27LQ71UM5 84 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 R3HCC1LQ7Z5L2 792 aaKnown RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 TMCO5AQ8N6Q1 288 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms