RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CYTIPO60759 359 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 EGR1P18146 543 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 APOBEC3AP31941 199 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-203ENST00000409225 CAV1Q03135 178 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 DUSP5Q16690 384 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 CBLN3Q6UW01 205 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 ZDHHC24Q6UX98 284 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 SLC16A11Q8NCK7 471 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 CEP70Q8NHQ1 597 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 FBXO17Q96EF6 278 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 CARD8Q9Y2G2 431 aa14.64□□□□□ -0.07
CHMP3-203ENST00000409225 GPC6Q9Y625 555 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-203ENST00000409225 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 IFI6P09912 130 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF23P17027 643 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 PRKCAP17252 672 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 LCN1P31025 176 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 P2RX1P51575 399 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 SELENBP1Q13228 472 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF678Q5SXM1 525 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 FBXW9Q5XUX1 488 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 ANKRD26P1Q6NSI1 321 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 COX18Q8N8Q8 333 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 CIDECQ96AQ7 238 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-203ENST00000409225 GIMAP5Q96F15 307 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 C16orf58Q96GQ5 468 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 TMEM237Q96Q45 408 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 OR5B2Q96R09 309 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 NAPGQ99747 312 aaPredicted RBP14.63□□□□□ -0.07
CHMP3-203ENST00000409225 ANKZF1Q9H8Y5 726 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 FKRPQ9H9S5 495 aa14.63□□□□□ -0.07
CHMP3-203ENST00000409225 UTP11Q9Y3A2 253 aaKnown RBP14.63□□□□□ -0.07
CHMP3-203ENST00000409225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHMP3-203ENST00000409225 NPIPA5A0A0B4J1W7 369 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 LOC390937A0A1W2PQ73 354 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 LRP5LA4QPB2 252 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 NPIPA7E9PJI5 369 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 PDPK1O15530 556 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ALOX5P09917 674 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 NPIPA8P0DM63 369 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 SERPINB4P48594 390 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 GNG11P61952 73 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 PHC1P78364 1004 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 NDUFAF6Q330K2 333 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 LRIG3Q6UXM1 1119 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 TMEM151AQ8N4L1 468 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 GPR119Q8TDV5 335 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 JADE3Q92613 823 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF524Q96C55 264 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 MS4A4EQ96PG1 132 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 BPESC1Q9GZL8 116 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 OCEL1Q9H607 264 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 GIN1Q9NXP7 522 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 TMEFF2Q9UIK5 374 aaPredicted RBP14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ICAM5Q9UMF0 924 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ACTL7BQ9Y614 415 aa14.62□□□□□ -0.07
CHMP3-203ENST00000409225 ARFGEF3Q5TH69 2177 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 CCDC151A5D8V7 595 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ATP6V1G2-DDX39BF2Z307 99 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 VENTXO95231 258 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 H6PDO95479 791 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ENO1P06733 434 aaKnown RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 INHBAP08476 426 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 TAC1P20366 129 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 PHBP35232 272 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ACTG1P63261 375 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 POU6F2P78424 691 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 C2orf54Q08AI8 447 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 MLC1Q15049 377 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 IMPG1Q17R60 797 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 SWI5Q1ZZU3 235 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 MST1LQ2TV78 715 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 MTERF4Q7Z6M4 381 aaKnown RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 SGMS2Q8NHU3 365 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 RFWD2Q8NHY2 731 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 APH1AQ96BI3 265 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ZMYND19Q96E35 227 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 MRGPRX4Q96LA9 322 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 VRK1Q99986 396 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 BHLHE41Q9C0J9 482 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 ASB6Q9NWX5 421 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 NOSIPQ9Y314 301 aaKnown RBP14.61□□□□□ -0.07
CHMP3-203ENST00000409225 MGAM2Q2M2H8 2515 aa14.61□□□□□ -0.07
CHMP3-203ENST00000409225 HEATR1Q9H583 2144 aaKnown RBP14.6□□□□□ -0.07
CHMP3-203ENST00000409225 GTPBP1O00178 669 aaKnown RBP14.6□□□□□ -0.07
CHMP3-203ENST00000409225 FOXG1P55316 489 aaPredicted RBP14.6□□□□□ -0.07
CHMP3-203ENST00000409225 SUMO3P55854 103 aaPredicted RBP14.6□□□□□ -0.07
CHMP3-203ENST00000409225 GABRA6Q16445 453 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 IKBIPQ70UQ0 350 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 SLC46A3Q7Z3Q1 461 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 C3orf56Q8N813 242 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 EGLN2Q96KS0 407 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 MYOZ1Q9NP98 299 aaPredicted RBP14.6□□□□□ -0.07
CHMP3-203ENST00000409225 TAS2R16Q9NYV7 291 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 EMC3Q9P0I2 261 aa14.6□□□□□ -0.07
CHMP3-203ENST00000409225 WBP11Q9Y2W2 641 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms