RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 MIS12Q9H081 205 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TRIM36Q9NQ86 728 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 DYRK4Q9NR20 520 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TUBGCP4Q9UGJ1 667 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 NDRG3Q9UGV2 375 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 LNPEPQ9UIQ6 1025 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 PLLPQ9Y342 182 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 UBIAD1Q9Y5Z9 338 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 NPTNQ9Y639 398 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 USH1CQ9Y6N9 552 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 ANKRD36CQ5JPF3 1778 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TNRC6CQ9HCJ0 1690 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 A0A1W2PPV9 198 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 LRP5LA4QPB2 252 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MGAT4DA6NG13 374 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 SGK494L7N484 410 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TXNDC9O14530 226 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 PRKRAO75569 313 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 ZMPSTE24O75844 475 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MYL2P10916 166 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 HLA-GP17693 338 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MATN1P21941 496 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TACR3P29371 465 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 HOXA7P31268 230 aaPredicted RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 RPL22P35268 128 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 KIR3DL2P43630 455 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 FHITP49789 147 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 GEMP55040 296 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 DLX2Q07687 328 aaPredicted RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 FOXE3Q13461 319 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 HNF4GQ14541 408 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 EMC2Q15006 297 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 EFNB3Q15768 340 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 USF2Q15853 346 aaPredicted RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 ITPRIPL2Q3MIP1 535 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TTC33Q6PID6 262 aaPredicted RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 SLC25A47Q6Q0C1 308 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 PRSS57Q6UWY2 283 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 METTL7BQ6UX53 244 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MON1BQ7L1V2 547 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MRPL21Q7Z2W9 205 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MFSD9Q8NBP5 474 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 RND1Q92730 232 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 VSTM2LQ96N03 204 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 EBF2Q9HAK2 575 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 INIPQ9NRY2 104 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 CISHQ9NSE2 258 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 TBL2Q9Y4P3 447 aaKnown RBP3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MYH1P12882 1939 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 MYH4Q9Y623 1939 aa3.95□□□□□ -1.78
GTDC1-206ENST00000409214 NHSL1Q5SYE7 1610 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 ARAP2Q8WZ64 1704 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 A0A1W2PPE3 182 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 SRRM3A6NNA2 597 aaPredicted RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 TRIM49D1C9J1S8 452 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 MLNRO43193 412 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 HSPA12AO43301 675 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 EDF1O60869 148 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 CNOT3O75175 753 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 RNF8O76064 485 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 RCBTB2O95199 551 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 OAS1P00973 400 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 P04436 131 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 FABP1P07148 127 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 APRTP07741 180 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 GSTT2P0CG29 244 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 GSTT2BP0CG30 244 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 ENO3P13929 434 aaPredicted RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 HMGB2P26583 209 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 OR1E1P30953 314 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 RGS21Q2M5E4 152 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 FAM102AQ5T9C2 384 aaPredicted RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 TMEM225Q6GV28 225 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 CPEB2Q7Z5Q1 589 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 RCOR2Q8IZ40 523 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 PDIK1LQ8N165 341 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 BEST3Q8N1M1 668 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 SPATA6LQ8N4H0 392 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 TEX26Q8N6G2 289 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 RNF149Q8NC42 400 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 NPEPL1Q8NDH3 523 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 OR2AK2Q8NG84 335 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 OR56A1Q8NGH5 318 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 ADAMTS17Q8TE56 1095 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 SPRYD4Q8WW59 207 aaPredicted RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 DNAJC9Q8WXX5 260 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 SNAPC3Q92966 411 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 TIMD4Q96H15 378 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 ZNF333Q96JL9 665 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 TMEM175Q9BSA9 504 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 WACQ9BTA9 647 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 C2orf42Q9NWW7 574 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 GMPR2Q9P2T1 348 aaKnown RBP3.94□□□□□ -1.78
GTDC1-206ENST00000409214 LHX3Q9UBR4 397 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 MIOXQ9UGB7 285 aa3.94□□□□□ -1.78
GTDC1-206ENST00000409214 FZD4Q9ULV1 537 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms