RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LIMS3P0CW19 117 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 LIMS4P0CW20 117 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 MGMTP16455 207 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
DUSP28-202ENST00000405954 LHX1P48742 406 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 PRKXP51817 358 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 MANFP55145 182 aaKnown RBP13.1□□□□□ -0.31
DUSP28-202ENST00000405954 BIKQ13323 160 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 TGIF1Q15583 401 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OR5W2Q8NH69 310 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SLC7A13Q8TCU3 470 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SLC6A18Q96N87 628 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 A0A0D9SG52 128 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 A8MVJ9 347 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SLC31A2O15432 143 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OR2T1O43869 369 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 KLK8O60259 260 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 CLN5O75503 358 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
DUSP28-202ENST00000405954 IFNA17P01571 189 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 PMP2P02689 132 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 C6P13671 934 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 GTF2F2P13984 249 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 DCTDP32321 178 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 PODNL1Q6PEZ8 512 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 NDUFAF7Q7L592 441 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 TGIF2LXQ8IUE1 241 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 FAM26EQ8N5C1 309 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 TMEM68Q96MH6 324 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 LHX6Q9UPM6 363 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
DUSP28-202ENST00000405954 RBBP9O75884 186 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 AQP8O94778 261 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 RHOQP17081 205 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 RAG2P55895 527 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 TRAM1Q15629 374 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OR10K2Q6IF99 312 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 UBAC2Q8NBM4 344 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 BRIX1Q8TDN6 353 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 TMED6Q8WW62 240 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 GGACTQ9BVM4 153 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 SARGQ9BW04 601 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 TREM2Q9NZC2 230 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MED16Q9Y2X0 877 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 hCG_1809904A0A1W2PP81 198 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 A0A1W2PR64 198 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 A0A1W2PRV1 198 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 GGT3PA6NGU5 568 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 EEF1E1-BLOC1S5C9J1V9 151 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MT-ND5P03915 603 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 BTF3P20290 206 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 VAMP1P23763 118 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 SLC9B2Q86UD5 537 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 CPOQ8IVL8 374 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 DMRTA2Q96SC8 542 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ACKR4Q9NPB9 350 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 A6NLC8 198 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ARL6IP5O75915 188 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 YIF1AO95070 293 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 SFTPCP11686 197 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MNDAP41218 407 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 RBM34P42696 430 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 DOC2AQ14183 400 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 ARRDC2Q8TBH0 407 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 EDARADDQ8WWZ3 215 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 GTF3AQ92664 365 aaKnown RBP13.09□□□□□ -0.31
DUSP28-202ENST00000405954 RAB7BQ96AH8 199 aa13.09□□□□□ -0.31
DUSP28-202ENST00000405954 OTUB2Q96DC9 234 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms