RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CCDC81Q6ZN84 652 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 IMMP1LQ96LU5 166 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 PITX2Q99697 317 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 YTHDF1Q9BYJ9 559 aaKnown RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 TBL1XR1Q9BZK7 514 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 MMP25Q9NPA2 562 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 RPS6KB2Q9UBS0 482 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 RALYQ9UKM9 306 aaKnown RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 NDRG4Q9ULP0 352 aaKnown RBP19.26■□□□□ 0.67
TPM1-208ENST00000404484 MYRFQ9Y2G1 1151 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 NTNG1Q9Y2I2 539 aa19.26■□□□□ 0.67
TPM1-208ENST00000404484 NSG1A0A0A6YYJ2 146 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 ALG1L2C9J202 215 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 ZNF264O43296 627 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 RYKP34925 604 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 ACAA2P42765 397 aaKnown RBP19.25■□□□□ 0.67
TPM1-208ENST00000404484 MYBPC1Q00872 1141 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 DNASE1L3Q13609 305 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 C1orf94Q6P1W5 598 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 TTC33Q6PID6 262 aaPredicted RBP19.25■□□□□ 0.67
TPM1-208ENST00000404484 KIRREL2Q6UWL6 708 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 APLFQ8IW19 511 aaPredicted RBP19.25■□□□□ 0.67
TPM1-208ENST00000404484 RNF113BQ8IZP6 322 aaKnown RBP19.25■□□□□ 0.67
TPM1-208ENST00000404484 SLC15A4Q8N697 577 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 OR11G2Q8NGC1 345 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 GNPDA2Q8TDQ7 276 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 HS6ST2Q96MM7 605 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 ZNF696Q9H7X3 374 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 FLRT3Q9NZU0 649 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 MYOTQ9UBF9 498 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 PCDHGA6Q9Y5G7 932 aa19.25■□□□□ 0.67
TPM1-208ENST00000404484 K7ENP7 123 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 SOCS6O14544 535 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 CHP2O43745 196 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 ICAM2P13598 275 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 OSMP13725 252 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 POU2F1P14859 743 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 POLR2IP36954 125 aaKnown RBP19.24■□□□□ 0.67
TPM1-208ENST00000404484 STAT5AP42229 794 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 SLC6A8P48029 635 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 NUP107P57740 925 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 FAM69BQ5VUD6 431 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 INO80CQ6PI98 192 aaPredicted RBP19.24■□□□□ 0.67
TPM1-208ENST00000404484 KLHL17Q6TDP4 642 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 MBOAT2Q6ZWT7 520 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 MISPQ8IVT2 679 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 SNRNP27Q8WVK2 155 aaKnown RBP19.24■□□□□ 0.67
TPM1-208ENST00000404484 TMCO6Q96DC7 493 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 MPP4Q96JB8 637 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 HRASLS5Q96KN8 279 aa19.24■□□□□ 0.67
TPM1-208ENST00000404484 CACNA1GO43497 2377 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 A0A0B4J2E0 115 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 LOC101059948A0A1B0GTJ6 334 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 A0A1B0GX12 115 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 E9PQ18 207 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 WWP2O00308 870 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 THY1P04216 161 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 EVI2BP34910 448 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 RPP38P78345 283 aaKnown RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 SKP2Q13309 424 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 NUP54Q7Z3B4 507 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 ZER1Q7Z7L7 766 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 NKAIN4Q8IVV8 208 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 POGLUT1Q8NBL1 392 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 THAP3Q8WTV1 239 aaPredicted RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 DNAJA4Q8WW22 397 aaPredicted RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 TTC9Q92623 222 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 LAT2Q9GZY6 243 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 LIN28AQ9H9Z2 209 aaKnown RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 ZBTB20Q9HC78 741 aaPredicted RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 PCDHGB5Q9Y5G0 923 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 A0A1B0GWA3 101 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 TMEM200CA6NKL6 621 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 NDUFB5O43674 189 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 EIF4E2O60573 245 aaKnown RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 NADKO95544 446 aaPredicted RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 LINGO3P0C6S8 592 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 LIFP15018 202 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 OTX2P32243 289 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 DLSTP36957 453 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 RBM34P42696 430 aaKnown RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 ALDH6A1Q02252 535 aaKnown RBP19.23■□□□□ 0.67
TPM1-208ENST00000404484 BLMHQ13867 455 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 CD226Q15762 336 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 KCTD21Q4G0X4 260 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 TMEM154Q6P9G4 183 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 ULK3Q6PHR2 472 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 PPP1R32Q7Z5V6 425 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 ZNF786Q8N393 782 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 TMCO5AQ8N6Q1 288 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 GATSQ8NAP1 163 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 TMEM5Q9Y2B1 443 aa19.23■□□□□ 0.67
TPM1-208ENST00000404484 LYPD3O95274 346 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 CRISP1P54107 249 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 TSPAN31Q12999 210 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 RAPSNQ13702 412 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 ALG10BQ5I7T1 473 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 APOOLQ6UXV4 268 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 DEPDC4Q8N2C3 294 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 RNF217Q8TC41 542 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms