RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RASA2Q15283 850 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GABRA6Q16445 453 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZSWIM7Q19AV6 140 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ARL13AQ5H913 290 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF544Q6NX49 715 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GPRIN3Q6ZVF9 776 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 P2RY8Q86VZ1 359 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLC43A2Q8N370 569 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 REXO5Q96IC2 774 aaKnown RBP10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 BPESC1Q9GZL8 116 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MRPL46Q9H2W6 279 aaKnown RBP10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C12orf65Q9H3J6 166 aaKnown RBP10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TNFRSF12AQ9NP84 129 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MYNNQ9NPC7 610 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 UBQLN4Q9NRR5 601 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GIN1Q9NXP7 522 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NTMQ9P121 344 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KLHL9Q9P2J3 617 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TMCO1Q9UM00 188 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MGAT4BQ9UQ53 548 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CARD8Q9Y2G2 431 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SAR1BQ9Y6B6 198 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ATP23Q9Y6H3 246 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF716A6NP11 495 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF724A8MTY0 619 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ATP6V1G2-DDX39BF2Z307 99 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ETV2O00321 342 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 IFI6P09912 130 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 EFNA1P20827 205 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NTSP30990 170 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 EIF1P41567 113 aaKnown RBP10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C2orf54Q08AI8 447 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KLHL26Q53HC5 615 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLC25A53Q5H9E4 307 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NUP43Q8NFH3 380 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MUS81Q96NY9 551 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SHCBP1LQ9BZQ2 653 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 QRSL1Q9H0R6 528 aaKnown RBP10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TIGARQ9NQ88 270 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NINJ2Q9NZG7 142 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CCL27Q9Y4X3 112 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KCNE3Q9Y6H6 103 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
SPTLC1P3-201ENST00000403408 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TTC36A6NLP5 189 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 NPIPB9F8W1W9 429 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 LILRA1O75019 489 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SUPT7LO94864 414 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 HNF1AP20823 631 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 HMOX2P30519 316 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 APOBEC3AP31941 199 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 COMPP49747 757 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 KIAA0040Q15053 153 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 CARTPTQ16568 116 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FBXW9Q5XUX1 488 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ABLIM2Q6H8Q1 611 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 BHLHB9Q6PI77 547 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 GALNT5Q7Z7M9 940 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 MISPQ8IVT2 679 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 CDRT4Q8N9R6 151 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ZNF527Q8NB42 609 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SPATA4Q8NEY3 305 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 OR52E4Q8NGH9 312 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 OR6Y1Q8NGX8 325 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PHOSPHO1Q8TCT1 267 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FBXO17Q96EF6 278 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 DNAJA3Q96EY1 480 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 MIEF1Q9NQG6 463 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SIRT3Q9NTG7 399 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TMEM216Q9P0N5 145 aa10.39□□□□□ -0.75
SPTLC1P3-201ENST00000403408 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 CENPVL1A0A0U1RR11 272 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 NDUFS8O00217 210 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SCDO00767 359 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 IGFBP1P08833 259 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FRKP42685 505 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 P2RX1P51575 399 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PHC1P78364 1004 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TSNAXIP1Q2TAA8 658 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 C9orf135Q5VTT2 229 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 NOXRED1Q6NXP6 359 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 LRIG3Q6UXM1 1119 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ZNF100Q8IYN0 542 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 CDS1Q92903 461 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 BHLHE41Q9C0J9 482 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 GSTO2Q9H4Y5 243 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ZDHHC18Q9NUE0 388 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TMEFF2Q9UIK5 374 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 MOKQ9UQ07 419 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PTGDR2Q9Y5Y4 395 aa10.38□□□□□ -0.75
SPTLC1P3-201ENST00000403408 GPC6Q9Y625 555 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms