RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 NXNQ6DKJ4 435 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 TYW3Q6IPR3 259 aaKnown RBP13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 FRRS1Q6ZNA5 592 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 EIF3MQ7L2H7 374 aaKnown RBP13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 MAVSQ7Z434 540 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF619Q8N2I2 560 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 ST8SIA1Q92185 356 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 RAB8BQ92930 207 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 ARL8AQ96BM9 186 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 C7orf26Q96N11 449 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 OPN3Q9H1Y3 402 aaPredicted RBP13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 TIGARQ9NQ88 270 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 SDR39U1Q9NRG7 319 aaPredicted RBP13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 ZIM2Q9NZV7 527 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 EDARQ9UNE0 448 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 PROCRQ9UNN8 238 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 TESMINQ9Y4I5 508 aa13.32□□□□□ -0.28
SMIM11A-203ENST00000399299 CENPVL1A0A0U1RR11 272 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 C9JVG2 144 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 HMGN4O00479 90 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 EFNA2O43921 213 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC22A3O75751 556 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CSTAP01040 98 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 OPN1LWP04000 364 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 SHC1P29353 583 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 SFTPDP35247 375 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 MAGEA8P43361 318 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CCR4P51679 360 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CASP9P55211 416 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CTBP2P56545 445 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CARD18P57730 90 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 HPCAP84074 193 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 FAM27E3Q08E93 113 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 QPRTQ15274 297 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 GTF2IRD2BQ6EKJ0 949 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 MSANTD1Q6ZTZ1 278 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 GTF2IRD2Q86UP8 949 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 RNF130Q86XS8 419 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 RFWD2Q8NHY2 731 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 ZFP90Q8TF47 636 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 NRGNQ92686 78 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 OSTF1Q92882 214 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 CPNE4Q96A23 557 aaPredicted RBP13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 ATP6V1G3Q96LB4 118 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 TRNT1Q96Q11 434 aaKnown RBP13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 INPP5KQ9BT40 448 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 PLSCR4Q9NRQ2 329 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 ST6GALNAC2Q9UJ37 374 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 LIPT1Q9Y234 373 aa13.31□□□□□ -0.28
SMIM11A-203ENST00000399299 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 CASKO14936 926 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 HRGP04196 525 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 POU2F1P14859 743 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 CD1EP15812 388 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 PGCP20142 388 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 CCKARP32238 428 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 UGT2B10P36537 528 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 PGM1P36871 562 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 CDKN2CP42773 168 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 MAPK14Q16539 360 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 FBXW10Q5XX13 1052 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF621Q6ZSS3 439 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 OLIG3Q7RTU3 272 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF610Q8N9Z0 462 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 RNF128Q8TEB7 428 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 TMEM234Q8WY98 164 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 OR52B2Q96RD2 323 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 THUMPD3Q9BV44 507 aaKnown RBP13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 COQ10BQ9H8M1 238 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 GP6Q9HCN6 339 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 EXOSC3Q9NQT5 275 aaKnown RBP13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 USH1CQ9Y6N9 552 aa13.3□□□□□ -0.28
SMIM11A-203ENST00000399299 C16orf97H3BN30 126 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 RFXANKO14593 260 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 UBDO15205 165 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 DIAPH2O60879 1101 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 TGDSO95455 350 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 H6PDO95479 791 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 KRT75O95678 551 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 UBTFL6P0CB48 400 aaPredicted RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 ZCCHC18P0CG32 403 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 AGTR1P30556 359 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 KCNJ5P48544 419 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 MRPL19P49406 292 aaKnown RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 IST1P53990 364 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 TMEM176BQ3YBM2 270 aaPredicted RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 GPAT3Q53EU6 434 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 LRRC74BQ6ZQY2 392 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 CMIPQ8IY22 773 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 LRRC8CQ8TDW0 803 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms