RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
APOB-202ENST00000399256 ATG4BQ9Y4P1 393 aa12.99□□□□□ -0.33
APOB-202ENST00000399256 ANTXRLA6NF34 631 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 MFSD2BA6NFX1 497 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 C4orf51C9J302 202 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 L7N2F9 121 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
APOB-202ENST00000399256 GATBO75879 557 aaKnown RBP12.98□□□□□ -0.33
APOB-202ENST00000399256 IL32P24001 234 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 NOS3P29474 1203 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 SLC25A25Q6KCM7 469 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 DEFB128Q7Z7B8 93 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 NRSN1Q8IZ57 195 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 UXS1Q8NBZ7 420 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 NUP43Q8NFH3 380 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 OR9A2Q8NGT5 310 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 COQ8AQ8NI60 647 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 ZNF671Q8TAW3 534 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 NR4A3Q92570 626 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 SARGQ9BW04 601 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 TM7SF3Q9NS93 570 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 SLC23A2Q9UGH3 650 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 A0A1W2PR48 441 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 PAPLNO95428 1278 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 GYPBP06028 91 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 CLTBP09497 229 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 EPXP11678 715 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 RAD52P43351 418 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 TMEM64Q6YI46 380 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 SSX6Q7RTT6 188 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 OR56A1Q8NGH5 318 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 OR52L1Q8NGH7 329 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
APOB-202ENST00000399256 C1QTNF2Q9BXJ5 285 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
APOB-202ENST00000399256 TOR1AO14656 332 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SPINT1O43278 529 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SC5DO75845 299 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 FCER2P06734 321 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 PRG2P13727 222 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 MAKP20794 623 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 HCCSP53701 268 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 KIAA1024LP59773 190 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ZNF85Q03923 595 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 LTB4RQ15722 352 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 LY6G5CQ5SRR4 150 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SMIM4Q8WVI0 70 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ZNF764Q96H86 408 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 TEAD3Q99594 435 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 HRASLSQ9HDD0 168 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 C20orf141Q9NUB4 165 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ZNF69Q9UC07 566 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 H3BUI4 141 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 MID1O15344 667 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 TEAD1P28347 426 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 CCR9P51686 369 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 TRAM1Q15629 374 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 FAM198BQ6UWH4 519 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SFXN5Q8TD22 340 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 IRF7Q92985 503 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ZNF578Q96N58 590 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 A0A1W2PPV9 198 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 BHLHE40O14503 412 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 FLRT2O43155 660 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 LRG1P02750 347 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 IL9P15248 144 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 CSNK1G2P78368 415 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 PRR5P85299 388 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SLC9A5Q14940 896 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 TP53I3Q53FA7 332 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 FAAP20Q6NZ36 180 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SEZ6L2Q6UXD5 910 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 ORAI1Q96D31 301 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 SIPA1Q96FS4 1042 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 PEX11GQ96HA9 241 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 C6orf106Q9H6K1 298 aaPredicted RBP12.97□□□□□ -0.33
APOB-202ENST00000399256 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
APOB-202ENST00000399256 LAMA2P24043 3122 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms