RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ATG4BQ9Y4P1 393 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 KLK4Q9Y5K2 254 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 IER3IP1Q9Y5U9 82 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 C2orf72A6NCS6 295 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 CD300LBA8K4G0 201 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 SYT5O00445 386 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 ALDOBP05062 364 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 SCG5P05408 212 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 TIMP2P16035 220 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 SIM1P81133 766 aaPredicted RBP7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 OR1Q1Q15612 314 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 MSMO1Q15800 293 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 TP53I3Q53FA7 332 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 LPCAT3Q6P1A2 487 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 ADAMTSL4Q6UY14 1074 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 CLEC14AQ86T13 490 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 SLC39A11Q8N1S5 342 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 OR52E1Q8NGJ3 308 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 PAPOLGQ9BWT3 736 aaKnown RBP7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 SLCO5A1Q9H2Y9 848 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 TMEM100Q9NV29 134 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 FTSJ1Q9UET6 329 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 A3GALT2U3KPV4 340 aa7.85□□□□□ -1.15
SPTLC3-201ENST00000399002 APOC3P02656 99 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 MMP12P39900 470 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 CAV3P56539 151 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 CGB2Q6NT52 195 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 MBOAT2Q6ZWT7 520 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 ZNF551Q7Z340 670 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 OR52R1Q8NGF1 315 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 FAM3CQ92520 227 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 NEIL2Q969S2 332 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SLC19A3Q9BZV2 496 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 UBQLN4Q9NRR5 601 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 GPATCH2Q9NW75 528 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SDHAF2Q9NX18 166 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PIAS3Q9Y6X2 628 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 A0A1W2PPK0 400 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PRSS38A1L453 326 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 A6NLC8 198 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 K7ERQ8 282 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 M0R3H8 397 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 GMDSO60547 372 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 HOXC8P31273 242 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 TMEM201Q5SNT2 666 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 AGAP7PQ5VUJ5 663 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 AGAP6Q5VW22 663 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PODNL1Q6PEZ8 512 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 MFSD6LQ8IWD5 586 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 C12orf45Q8N5I9 185 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 OR4M1Q8NGD0 313 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 ZBTB8AQ96BR9 441 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 AGAP4Q96P64 663 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 HDAC8Q9BY41 377 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 NOX3Q9HBY0 568 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 OR2S2Q9NQN1 319 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 LHX3Q9UBR4 397 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 GPR52Q9Y2T5 361 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 LOC102723532A0A0G2JNH3 316 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 UBFD1O14562 309 aaKnown RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SULT1B1O43704 296 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 GAAP10253 952 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 CD6P30203 668 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 BDKRB2P30411 391 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 P2RY2P41231 377 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 MAGEA3P43357 314 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 LUMP51884 338 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 MRPS21P82921 87 aaKnown RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 RELAQ04206 551 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 EMX1Q04741 257 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SELPLGQ14242 412 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 NFATC4Q14934 902 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PLK5Q496M5 336 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 BCL7AQ4VC05 210 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PIP5KL1Q5T9C9 394 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 HBMQ6B0K9 141 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PTRH1Q86Y79 214 aaKnown RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 PARP16Q8N5Y8 322 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 CHST14Q8NCH0 376 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 NT5C3BQ969T7 300 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SNX18Q96RF0 628 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 METTL9Q9H1A3 318 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 OR52D1Q9H346 318 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SLC6A20Q9NP91 592 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 LAMB1P07942 1786 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 RGPD2P0DJD1 1756 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 N4BP2Q86UW6 1770 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 ANTXRLA6NF34 631 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 NUDT19A8MXV4 375 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SSX5O60225 188 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 SCAF4O95104 1147 aaKnown RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 CER1O95813 267 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 LCKP06239 509 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 DCNP07585 359 aaKnown RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 JUNBP17275 347 aaPredicted RBP7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 GCAP28676 217 aa7.84□□□□□ -1.15
SPTLC3-201ENST00000399002 RBMS2Q15434 407 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms