RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GSG1LQ6UXU4 331 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 CDRT4Q8N9R6 151 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 SACM1LQ9NTJ5 587 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 RPS5P46782 204 aaKnown RBP13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 RAB4BP61018 213 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 CCNJQ5T5M9 372 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 RANBP10Q6VN20 620 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 SYT13Q7L8C5 426 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 OR1J4Q8NGS1 313 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 SENP5Q96HI0 755 aaPredicted RBP13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 MFRPQ9BY79 579 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 RIMS3Q9UJD0 308 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 NDUFB2O95178 105 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 C7P10643 843 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC6A8P48029 635 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 ERVK-25P63136 954 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 NTRK2Q16620 822 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF420Q8TAQ5 688 aaPredicted RBP13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 CHPT1Q8WUD6 406 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 LGALS12Q96DT0 336 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 HCAR1Q9BXC0 346 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 R4GN57 208 aa13.34□□□□□ -0.27
PCDHA11-201ENST00000398640 GABBR2O75899 941 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 PSMB10P40306 273 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 OR1D5P58170 312 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 PRPS1P60891 318 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 RSC1A1Q92681 617 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 FER1L6-AS2Q96M78 137 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC25A18Q9H1K4 315 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 ABCG5Q9H222 651 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 LSM5Q9Y4Y9 91 aaKnown RBP13.33□□□□□ -0.27
PCDHA11-201ENST00000398640 JRKO75564 520 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 CAPN3P20807 821 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 PRLHRP49683 370 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 PLCXD3Q63HM9 321 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 CPOQ8IVL8 374 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF845Q96IR2 970 aaPredicted RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF223Q9UK11 482 aaPredicted RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 SERPINA5P05154 406 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 RGRP47804 291 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 CALHM2Q9HA72 323 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 GPR160Q9UJ42 338 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 MED16Q9Y2X0 877 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 TPOP07202 933 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 CCR2P41597 374 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 KIAA1024LP59773 190 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 MICAQ29983 383 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC2A12Q8TD20 617 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 FKBP10Q96AY3 582 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 ARL6Q9H0F7 186 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 FAM86C1Q9NVL1 165 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 PCDHA9Q9Y5H5 950 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 ANTXRLA6NF34 631 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 MRPL33O75394 65 aaKnown RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 IDUAP35475 653 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 TMBIM6P55061 237 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 MAELQ96JY0 434 aaKnown RBP13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 POLHQ9Y253 713 aa13.33□□□□□ -0.28
PCDHA11-201ENST00000398640 OSMP13725 252 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 CRABP1P29762 137 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SSR4P51571 173 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ERVK-16P61578 105 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SIGLEC14Q08ET2 396 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 IL1F10Q8WWZ1 152 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ALG8Q9BVK2 526 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 DHCR7Q9UBM7 475 aaKnown RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 TRAV27A0A087WT01 109 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 BAIAP2L2Q6UXY1 529 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF695Q8IW36 515 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 INSM2Q96T92 566 aaPredicted RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 AK6Q9Y3D8 172 aaKnown RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 DNAJB5O75953 348 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 GYPBP06028 91 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 DRD5P21918 477 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 CBLCQ9ULV8 474 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ZCWPW2A0A1B0GU75 182 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 UGT2B7P16662 529 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC5A2P31639 672 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 PTPRRQ15256 657 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 PAGE3Q5JUK9 113 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 OPN5Q6U736 354 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 PXKQ7Z7A4 578 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 OR4D6Q8NGJ1 314 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms