RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 TREX2Q9BQ50 279 aaPredicted RBP16.94■□□□□ 0.3
COLCA2-201ENST00000398035 PINK1Q9BXM7 581 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 ENKD1Q9H0I2 346 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 BCL2L10Q9HD36 194 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 A4GALTQ9NPC4 353 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 SLC25A37Q9NYZ2 338 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 VAPAQ9P0L0 249 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 SLAMF8Q9P0V8 285 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.94■□□□□ 0.3
COLCA2-201ENST00000398035 MCTS1Q9ULC4 181 aaKnown RBP16.94■□□□□ 0.3
COLCA2-201ENST00000398035 EXPH5Q8NEV8 1989 aa16.94■□□□□ 0.3
COLCA2-201ENST00000398035 C5orf58C9J3I9 102 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 SYT5O00445 386 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 EIF1AYO14602 144 aaKnown RBP16.93■□□□□ 0.3
COLCA2-201ENST00000398035 OIP5O43482 229 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 BCHEP06276 602 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 APOBEC1P41238 236 aaKnown RBP16.93■□□□□ 0.3
COLCA2-201ENST00000398035 HTR3AP46098 478 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 ZNF136P52737 540 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 CARD18P57730 90 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 TFF3Q07654 80 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 QPRTQ15274 297 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 MAPRE2Q15555 327 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 LIN52Q52LA3 116 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 GTF2IRD2BQ6EKJ0 949 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 DLEU7Q6UYE1 221 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 GTF2IRD2Q86UP8 949 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 C9orf106Q8NAJ2 232 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 NAXEQ8NCW5 288 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 OR52P1PQ8NH57 321 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 ZNF563Q8TA94 476 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 PRRG4Q9BZD6 226 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 PIGMQ9H3S5 423 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 DSPPQ9NZW4 1301 aa16.93■□□□□ 0.3
COLCA2-201ENST00000398035 TRBV5-3A0A0A0MS03 114 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 CENPVL1A0A0U1RR11 272 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 NKX2-6A6NCS4 301 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 KDM4EB2RXH2 506 aaPredicted RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 SHISA8B8ZZ34 492 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 DYNC1I1O14576 645 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 SLC22A2O15244 555 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 NTN1O95631 604 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 TGM6O95932 706 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 NPPAP01160 153 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 PABPC4LP0CB38 370 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 RPS4Y1P22090 263 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 EIF1AXP47813 144 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 RNF144AP50876 292 aaPredicted RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 MAP2K6P52564 334 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 FOXF1Q12946 379 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 SELENBP1Q13228 472 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 PON3Q15166 354 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 TOMM34Q15785 309 aaPredicted RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 NDUFAF6Q330K2 333 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 RUNDC3AQ59EK9 446 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 COQ5Q5HYK3 327 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 HIST2H2BCQ6DN03 193 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 GGNQ86UU5 652 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 OR2V1Q8NHB1 315 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 MARVELD3Q96A59 401 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 INTS12Q96CB8 462 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 TMEM19Q96HH6 336 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 REXO5Q96IC2 774 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 KLHL15Q96M94 604 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 QRSL1Q9H0R6 528 aaKnown RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 TMEM38AQ9H6F2 299 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 ACER3Q9NUN7 267 aa16.92■□□□□ 0.3
COLCA2-201ENST00000398035 SPIN1Q9Y657 262 aaPredicted RBP16.92■□□□□ 0.3
COLCA2-201ENST00000398035 H0YC42 278 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 FAAHO00519 579 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 SYNGR4O95473 234 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 THBS1P07996 1170 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 ETS2P15036 469 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 ASCL1P50553 236 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 TPD52P55327 224 aaPredicted RBP16.91■□□□□ 0.3
COLCA2-201ENST00000398035 DLX5P56178 289 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 SESN3P58005 492 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 CYLC2Q14093 348 aaPredicted RBP16.91■□□□□ 0.3
COLCA2-201ENST00000398035 MAPK11Q15759 364 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 FBXL19-AS1Q494R0 122 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 GCNT6Q5T4J0 391 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 HBMQ6B0K9 141 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 ZNF787Q6DD87 383 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 CGB2Q6NT52 195 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 POMZP3Q6PJE2 187 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 MSRB3Q8IXL7 192 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 ACBD4Q8NC06 268 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 OR10D3Q8NH80 312 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 BBS10Q8TAM1 723 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 OSTF1Q92882 214 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 ADGRG7Q96K78 797 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 CGREF1Q99674 301 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 SH3GL1Q99961 368 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 SPATA5L1Q9BVQ7 753 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 SAR1AQ9NR31 198 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 GLRX2Q9NS18 164 aa16.91■□□□□ 0.3
COLCA2-201ENST00000398035 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
COLCA2-201ENST00000398035 CFAP73A6NFT4 308 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 BBIP1A8MTZ0 92 aa16.9■□□□□ 0.3
COLCA2-201ENST00000398035 CCDC22O60826 627 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms