RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ABCB7O75027 752 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 RAP2AP10114 183 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 IL7P13232 177 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 HOXB6P17509 224 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ANXA7P20073 488 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SUOXP51687 545 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 XKP51811 444 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ATP5J2P56134 94 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 MAXP61244 160 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 RPS15P62841 145 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CSNK2A1P68400 391 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TRIP4Q15650 581 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 BAK1Q16611 211 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 AMZ1Q400G9 498 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 DMRTA1Q5VZB9 504 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 GLYATQ6IB77 296 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 PIM3Q86V86 326 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ANGPTL5Q86XS5 388 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 PUSL1Q8N0Z8 303 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM199Q8N511 208 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CHDHQ8NE62 594 aaPredicted RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CSNK2A3Q8NEV1 391 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR13J1Q8NGT2 312 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4L1Q8NH43 312 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 OR56A3Q8NH54 315 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 POP5Q969H6 163 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 ARRDC3Q96B67 414 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC38A2Q96QD8 506 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM209Q96SK2 561 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 AIG1Q9NVV5 245 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM118AQ9NWS6 357 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 SMPXQ9UHP9 88 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 PURGQ9UJV8 347 aaKnown RBP6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 PEX16Q9Y5Y5 336 aa6.15□□□□□ -1.43
TM9SF4-202ENST00000398022 CBX4O00257 560 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 LANCL1O43813 399 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 LCMT2O60294 686 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 HPRP00739 348 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 NCK1P16333 377 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 RPL10P27635 214 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CST5P28325 142 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DDTP30046 118 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DLSTP36957 453 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 PXNP49023 591 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MMP15P51511 669 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ELLP55199 621 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DEFA1P59665 94 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DEFA3P59666 94 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 HERV-K104P63124 156 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SORDQ00796 357 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 BSXQ3C1V8 233 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 RABL3Q5HYI8 236 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 FBXW9Q5XUX1 488 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ASB18Q6ZVZ8 466 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MRPL21Q7Z2W9 205 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 NRMQ8IXM6 262 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 RDH10Q8IZV5 341 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 APCDD1Q8J025 514 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 UMODL1-AS1Q8N2C9 162 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OR13C9Q8NGT0 318 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OR10T2Q8NGX3 314 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 THAP4Q8WY91 577 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM46BQ96A09 425 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 BIRC7Q96CA5 298 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SMIM12Q96EX1 92 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OTUB1Q96FW1 271 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 AURKBQ96GD4 344 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OR2AG1Q9H205 316 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 GPN1Q9HCN4 374 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 PSG11Q9UQ72 335 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 UBE2J1Q9Y385 318 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CASTOR2A6NHX0 329 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MPTX1A8MV57 137 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DLGAP1O14490 977 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ARPC3O15145 178 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CREG1O75629 220 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CPNE6O95741 557 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF182P17025 639 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DRD1P21728 446 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 AOAHP28039 575 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SERTAD2Q14140 314 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SIRPB2Q5JXA9 342 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF691Q5VV52 312 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 VASNQ6EMK4 673 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 KLHL17Q6TDP4 642 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 LINGO2Q7L985 606 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM126BQ8IXS8 530 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF383Q8NA42 475 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SCARB1Q8WTV0 552 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 RBPMSQ93062 196 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM203Q969S6 136 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CPNE2Q96FN4 548 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 PERPQ96FX8 193 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 GLT1D1Q96MS3 346 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SIGLEC11Q96RL6 698 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CCDC3Q9BQI4 270 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 AARSD1Q9BTE6 412 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms