RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PIGAP37287 484 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 NPBWR2P48146 333 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 GSSP48637 474 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 HMGCS2P54868 508 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CLDN18P56856 261 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ERVK-25P63136 954 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 GLO1Q04760 184 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CAPRIN1Q14444 709 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ELAVL1Q15717 326 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 KLHL22Q53GT1 634 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF542PQ5EBM4 170 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 COQ5Q5HYK3 327 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 FAM151BQ6UXP7 276 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CEACAM20Q6UY09 585 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF367Q7RTV3 350 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 BCDIN3DQ7Z5W3 292 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ALYREFQ86V81 257 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 SATL1Q86VE3 508 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 MMAAQ8IVH4 418 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 SFTPA2Q8IWL1 248 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 MMD2Q8IY49 270 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ADAD2Q8NCV1 583 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 OR5M1Q8NGP8 315 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 NUBPLQ8TB37 319 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 FAM110BQ8TC76 370 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF473Q8WTR7 871 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 PIH1D2Q8WWB5 315 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 NELFBQ8WX92 580 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 EME1Q96AY2 570 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 P2RY11Q96G91 374 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 C3orf30Q96M34 536 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 NAPGQ99747 312 aaPredicted RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 AGPAT1Q99943 283 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 TTYH2Q9BSA4 534 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 GPR174Q9BXC1 333 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 DUSP22Q9NRW4 184 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CLEC2DQ9UHP7 191 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ZNHIT2Q9UHR6 403 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 PRPF19Q9UMS4 504 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 SAMHD1Q9Y3Z3 626 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CHST2Q9Y4C5 530 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 PTGDR2Q9Y5Y4 395 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 URGCP-MRPS24S4R325 110 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 TJP1Q07157 1748 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 EYSQ5T1H1 3165 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 RTL1A6NKG5 1358 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 MRC1P22897 1456 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 KAT6AQ92794 2004 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 FUOMA2VDF0 154 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 CCT8L1PA6NM43 557 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PGRMC1O00264 195 aaKnown RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 HSPB6O14558 160 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 CYB561D2O14569 222 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 RAB29O14966 203 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PFDN6O15212 129 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 TOX3O15405 576 aaPredicted RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 B4GALT5O43286 388 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 SRPX2O60687 465 aaPredicted RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 LPXNO60711 386 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 NDUFB4O95168 129 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 EML2O95834 649 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 CT62P0C5K7 136 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 CCNE1P24864 410 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 MPLP40238 635 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 RAP1GDS1P52306 607 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 EWSR1Q01844 656 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 RAD51Q06609 339 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 FCHO2Q0JRZ9 810 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 C1orf61Q13536 156 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 KRT81Q14533 505 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 FRG2Q64ET8 278 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 DUPD1Q68J44 220 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 RHBDF2Q6PJF5 856 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PLEKHG7Q6ZR37 379 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ACOT1Q86TX2 421 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 COMMD2Q86X83 199 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 MCOLN2Q8IZK6 566 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ELMOD1Q8N336 334 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PCDH20Q8N6Y1 951 aaKnown RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ARL14EPQ8N8R7 260 aaPredicted RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 NPEPL1Q8NDH3 523 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 FNDC8Q8TC99 324 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PPP4R1Q8TF05 950 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 TAAR8Q969N4 342 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ECHDC3Q96DC8 303 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 S1PR3Q99500 378 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 RAB11FIP5Q9BXF6 653 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 OR51V1Q9H2C8 321 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 PRSS16Q9NQE7 514 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 C1orf123Q9NWV4 160 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ASIC5Q9NY37 505 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 TINAGQ9UJW2 476 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 IKZF2Q9UKS7 526 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ERGIC3Q9Y282 383 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 TIMM10BQ9Y5J6 103 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 ETV7Q9Y603 341 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 BDP1A6H8Y1 2624 aa6.09□□□□□ -1.43
SMCO1-201ENST00000397537 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
SMCO1-201ENST00000397537 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms