RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GASTP01350 101 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 CCL3P10147 92 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 ANXA8P13928 327 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 SLC6A8P48029 635 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 P2RX1P51575 399 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 SOX8P57073 446 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 AQP11Q8NBQ7 271 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 KCNE4Q8WWG9 221 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 ACOT11Q8WXI4 607 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-203ENST00000397442 NIPSNAP1Q9BPW8 284 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 STMN3Q9NZ72 180 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 WIF1Q9Y5W5 379 aa25.08■■□□□ 1.61
CPNE1-203ENST00000397442 CHP2O43745 196 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 GMFGO60234 142 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 IGFBP5P24593 272 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 HSPA13P48723 471 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 IDH2P48735 452 aaKnown RBP25.07■■□□□ 1.6
CPNE1-203ENST00000397442 RRADP55042 308 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 SNTA1Q13424 505 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 COL28A1Q2UY09 1125 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 C6orf52Q5T4I8 152 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 OR5M10Q6IEU7 315 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 PGBD2Q6P3X8 592 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 ULK3Q6PHR2 472 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 ZNF227Q86WZ6 799 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 GALNT16Q8N428 558 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 B4GALNT2Q8NHY0 566 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 FRMD6Q96NE9 622 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 OSBPL11Q9BXB4 747 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 PROK2Q9HC23 129 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 ANKRD10Q9NXR5 420 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 KIF17Q9P2E2 1029 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 OR10H3O60404 316 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 HLCSP50747 726 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 COPZ1P61923 177 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 CDC20Q12834 499 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 TOMM34Q15785 309 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-203ENST00000397442 PRAMEF20Q5VT98 475 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 WBP2NLQ6ICG8 309 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 LINC00114Q6XXX2 140 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 ZNF248Q8NDW4 579 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 C3orf49Q96BT1 292 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 SGCZQ96LD1 299 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 RDH12Q96NR8 316 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 CPNE5Q9HCH3 593 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 TEKT2Q9UIF3 430 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 AP4B1Q9Y6B7 739 aa25.07■■□□□ 1.6
CPNE1-203ENST00000397442 IGLV3-32A0A0A0MS00 114 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ZNF891A8MT65 544 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-203ENST00000397442 UQCRBP14927 111 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ZIK1Q3SY52 487 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ALG10BQ5I7T1 473 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ZNF730Q6ZMV8 503 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 MDGA2Q7Z553 956 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ZER1Q7Z7L7 766 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 GALNT5Q7Z7M9 940 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 LINC00471Q8N535 108 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 SNIP1Q8TAD8 396 aaKnown RBP25.06■■□□□ 1.6
CPNE1-203ENST00000397442 GPR119Q8TDV5 335 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 MBOAT4Q96T53 435 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ZNF426Q9BUY5 554 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ING2Q9H160 280 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 TOR3AQ9H497 397 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 RAB26Q9ULW5 256 aa25.06■■□□□ 1.6
CPNE1-203ENST00000397442 ITPKBP27987 946 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 RPP38P78345 283 aaKnown RBP25.05■■□□□ 1.6
CPNE1-203ENST00000397442 CBFBQ13951 182 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 TAF11Q15544 211 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 SWT1Q5T5J6 900 aaKnown RBP25.05■■□□□ 1.6
CPNE1-203ENST00000397442 ABHD17BQ5VST6 288 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 SLC22A10Q63ZE4 541 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 RTL4Q6ZR62 310 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 CYP4Z2PQ8N1L4 340 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 DNAJA4Q8WW22 397 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-203ENST00000397442 TFAP2CQ92754 450 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 ADI1Q9BV57 179 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 ANGPTL4Q9BY76 406 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 KRT84Q9NSB2 600 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 RPS6KB2Q9UBS0 482 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 ZFHX4Q86UP3 3567 aa25.05■■□□□ 1.6
CPNE1-203ENST00000397442 KLK10O43240 276 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 POU2F1P14859 743 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 MERTKQ12866 999 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 INPP5JQ15735 1006 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-203ENST00000397442 RFX4Q33E94 735 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 SLC30A6Q6NXT4 461 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 C1orf94Q6P1W5 598 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 MBOAT2Q6ZWT7 520 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 GPALPP1Q8IXQ4 340 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 GTPBP3Q969Y2 492 aaKnown RBP25.04■■□□□ 1.6
CPNE1-203ENST00000397442 SDHAF3Q9NRP4 125 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 MED11Q9P086 117 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 PPP4R1LQ9P1A2 415 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 MGAT4BQ9UQ53 548 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 POLHQ9Y253 713 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 PIP5K1CO60331 668 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 ADAP00813 363 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 ACADSP16219 412 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 PGCP20142 388 aa25.04■■□□□ 1.6
CPNE1-203ENST00000397442 PTNP21246 168 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms