RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SNRPGP62308 76 aaKnown RBP13.71□□□□□ -0.22
CAPN3-207ENST00000397200 RNF4P78317 190 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 CDC20Q12834 499 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 COX10Q12887 443 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 DUSP5Q16690 384 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 DCAF10Q5QP82 559 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 TYW3Q6IPR3 259 aaKnown RBP13.71□□□□□ -0.22
CAPN3-207ENST00000397200 C1orf94Q6P1W5 598 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 PODNL1Q6PEZ8 512 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 SPACA3Q8IXA5 215 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 OR5L2Q8NGL0 311 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 DIO2Q92813 273 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 CDS1Q92903 461 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 STACQ99469 402 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 COPS4Q9BT78 406 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.22
CAPN3-207ENST00000397200 FNDC11Q9BVV2 318 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 DEFB126Q9BYW3 111 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 WWTR1Q9GZV5 400 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 SAP130Q9H0E3 1048 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 QRSL1Q9H0R6 528 aaKnown RBP13.71□□□□□ -0.22
CAPN3-207ENST00000397200 PIGUQ9H490 435 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 TRIM45Q9H8W5 580 aaPredicted RBP13.71□□□□□ -0.22
CAPN3-207ENST00000397200 IMPAD1Q9NX62 359 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 ASPMQ8IZT6 3477 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 MASP2O00187 686 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 EFSO43281 561 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 SOX30O94993 753 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 SERPINA7P05543 415 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 GSSP48637 474 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 RRADP55042 308 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 DCAF7P61962 342 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 HPCAP84074 193 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 IRF3Q14653 427 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 CTF1Q16619 201 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 VRK2Q86Y07 508 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 CLEC1AQ8NC01 280 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 NUBPLQ8TB37 319 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 GPR151Q8TDV0 419 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 GGHQ92820 318 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 MYDGFQ969H8 173 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 DCUN1D5Q9BTE7 237 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF350Q9GZX5 532 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 ATP13A2Q9NQ11 1180 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 DUSP22Q9NRW4 184 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 CNOT2Q9NZN8 540 aaKnown RBP13.7□□□□□ -0.22
CAPN3-207ENST00000397200 POLHQ9Y253 713 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF443Q9Y2A4 671 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-207ENST00000397200 IFT52Q9Y366 437 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 NCOR2Q9Y618 2525 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 APC2O95996 2303 aa13.7□□□□□ -0.22
CAPN3-207ENST00000397200 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 PRKNO60260 465 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 TPST2O60704 377 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 NKX2-2O95096 273 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 FADS2O95864 444 aaKnown RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 PIPP12273 146 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 GABRA3P34903 492 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 PPICP45877 212 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 SLC15A1P46059 708 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 PSG6Q00889 435 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 Q0VFX4 171 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 AQP6Q13520 282 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 NNATQ16517 81 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 ENTPD8Q5MY95 495 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 NPSR1Q6W5P4 371 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 CCDC81Q6ZN84 652 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 LRRC69Q6ZNQ3 347 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 ZER1Q7Z7L7 766 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 COX18Q8N8Q8 333 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 OR4K5Q8NGD3 323 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 OR52P1PQ8NH57 321 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 THAP3Q8WTV1 239 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 ADIPOR1Q96A54 375 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 LCORQ96JN0 433 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 SDF2Q99470 211 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 MTHFD2LQ9H903 347 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 Q9N2J8 555 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 WARS2Q9UGM6 360 aaKnown RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
CAPN3-207ENST00000397200 GPR55Q9Y2T6 319 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-207ENST00000397200 FRG2CA6NGY1 282 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 ARGFXA6NJG6 315 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 FCMRO60667 390 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 AK1P00568 194 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 GUSBP08236 651 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 CT45A8P0DMV1 189 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 CT45A9P0DMV2 189 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 DRD5P21918 477 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TGFBR2P37173 567 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 EEF1A1P68104 462 aaKnown RBP13.68□□□□□ -0.22
CAPN3-207ENST00000397200 CT45A2Q5DJT8 189 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 TMEM236Q5W0B7 351 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 HMGN2P46Q86SG4 172 aa13.68□□□□□ -0.22
CAPN3-207ENST00000397200 C17orf47Q8NEP4 570 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms