RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ZNF182P17025 639 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 THBS3P49746 956 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ARSDP51689 593 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF45Q02386 682 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZP2Q05996 745 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 GALEQ14376 348 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MSS51Q4VC12 460 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TP53I3Q53FA7 332 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 UNC50Q53HI1 259 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF684Q5T5D7 378 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PNCKQ6P2M8 343 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZDHHC24Q6UX98 284 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC46A3Q7Z3Q1 461 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC35F2Q8IXU6 374 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TTC9BQ8N6N2 239 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLCO2A1Q92959 643 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CDCP1Q9H5V8 836 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 NDRG3Q9UGV2 375 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 NPIPB15A6NHN6 443 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 RNF212BA8MTL3 300 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF736B4DX44 427 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 M0R3H8 397 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 FRS3O43559 492 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 GPR75O95800 540 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 DCNP07585 359 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC35E2BP0CK96 405 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF728P0DKX0 622 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SERPINA2P20848 420 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CYB561P49447 251 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 NOVA1P51513 510 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 INHBCP55103 352 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 GPX6P59796 221 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 IKZF1Q13422 519 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PIN1Q13526 163 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 ERV3-1Q14264 604 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SFRP5Q5T4F7 317 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 LDLRAD1Q5T700 205 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC22A10Q63ZE4 541 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 FCRLBQ6BAA4 426 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PRICKLE2Q7Z3G6 844 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 FAM160A2Q8N612 972 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 OR14A16Q8NHC5 309 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TCTN2Q96GX1 697 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MACROD1Q9BQ69 325 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC46A2Q9BY10 475 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 GNB4Q9HAV0 340 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 IL26Q9NPH9 171 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 OBP2AQ9NY56 170 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 AJAP1Q9UKB5 411 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 CA5BQ9Y2D0 317 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TARBP1Q13395 1621 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 UBFD1O14562 309 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF254O75437 659 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 NXPH2O95156 264 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 NDUFB7P17568 137 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 F2RP25116 425 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 HTR1EP28566 365 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PRKAR1BP31321 381 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 EPHA5P54756 1037 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MOGSQ13724 837 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 EXOSC7Q15024 291 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 PCGF3Q3KNV8 242 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 C2orf76Q3KRA6 126 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TSSK4Q6SA08 328 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PARS2Q7L3T8 475 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 RTL10Q7L3V2 364 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 KANSL1Q7Z3B3 1105 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TMEM139Q8IV31 216 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 LRRC18Q8N456 261 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SDR9C7Q8NEX9 313 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MYLIPQ8WY64 445 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TOX2Q96NM4 488 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TMEM246Q9BRR3 403 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 IER2Q9BTL4 223 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MED18Q9BUE0 208 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 EGLN3Q9H6Z9 239 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SMOXQ9NWM0 555 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CNIH4Q9P003 139 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SSUH2Q9Y2M2 353 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PRELID3BQ9Y3B1 194 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PCDHA9Q9Y5H5 950 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PIK3C2BO00750 1634 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF705FA8MVS1 300 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 E9PI62 339 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 RFXAPO00287 272 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF705DP0CH99 300 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF705BP0CI00 300 aaPredicted RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 GLB1P16278 677 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PKLRP30613 574 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 RAB5BP61020 215 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 RPS23P62266 143 aaKnown RBP6.75□□□□□ -1.33
UPF2-203ENST00000397053 AKR1C1Q04828 323 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TAZQ16635 292 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms