RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 FOXK2Q01167 660 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 KLF9Q13886 244 aaPredicted RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 ZNF234Q14588 700 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 PRAMEF8Q5VWM4 474 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 PRAMEF7Q5VXH5 474 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 DMKNQ6E0U4 476 aaPredicted RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 OR11G2Q8NGC1 345 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 HGDQ93099 445 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 TRIOO75962 3097 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 A0A1W2PRG6 482 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 NGFRP08138 427 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ADH5P11766 374 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 PTHLHP12272 177 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 DRD3P35462 400 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 PUDPQ08623 228 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ACSM3Q53FZ2 586 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 SARGQ9BW04 601 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 CACNG6Q9BXT2 260 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 BTN3A3O00478 584 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 CSF2RAP15509 400 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ACSL1P33121 698 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 FAAH2Q6GMR7 532 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ZAR1Q86SH2 424 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 LNX2Q8N448 690 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 ZNF527Q8NB42 609 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 C1QTNF7Q9BXJ2 289 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 C1QTNF2Q9BXJ5 285 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 WBP1LQ9NX94 342 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
NUP98-204ENST00000397004 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
NUP98-204ENST00000397004 SBK2P0C263 348 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 CSNK2A2P19784 350 aaPredicted RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 ARFIP1P53367 373 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 TCEA2Q15560 299 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 FNDC3BQ53EP0 1204 aaKnown RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 BPHLQ86WA6 291 aaPredicted RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 LRRC17Q8N6Y2 441 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 FKRPQ9H9S5 495 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 OR5F1O95221 314 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 EPCAMP16422 314 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 M6PRP20645 277 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 SRP54P61011 504 aaKnown RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 CRMP1Q14194 572 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 VN1R4Q7Z5H5 301 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 OR2L5Q8NG80 312 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 FANK1Q8TC84 345 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 FAIM2Q9BWQ8 316 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 ACTRT3Q9BYD9 372 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 KCNN2Q9H2S1 579 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 TRPV4Q9HBA0 871 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 TP53BP1Q12888 1972 aaPredicted RBP12.89□□□□□ -0.35
NUP98-204ENST00000397004 UNC119BA6NIH7 251 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 B8ZZF3 427 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 EPXP11678 715 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 ANXA3P12429 323 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 NDUFS1P28331 727 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 ZNF81P51508 661 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 BICRALQ6AI39 1079 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 OR52E1Q8NGJ3 308 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 IL21RQ9HBE5 538 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 ADAM30Q9UKF2 790 aa12.89□□□□□ -0.35
NUP98-204ENST00000397004 WDFY3Q8IZQ1 3526 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 EML2O95834 649 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 PYCR1P32322 319 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 MMP15P51511 669 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 GPR68Q15743 365 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 HMGB4Q8WW32 186 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 SDF2Q99470 211 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 ATG2BQ96BY7 2078 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 TRABD2BA6NFA1 517 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 I3L521 148 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms