RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MDC1Q14676 2089 aaKnown RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 HNRNPCL2B2RXH8 293 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 ERI3O43414 337 aaKnown RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 GMDSO60547 372 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PAPLNO95428 1278 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 TGM6O95932 706 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PAICSP22234 425 aaKnown RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 NFYAP23511 347 aaPredicted RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 NTSP30990 170 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 VEGFCP49767 419 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 DYRK1AQ13627 763 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 CLVS2Q5SYC1 327 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 OR4C11Q6IEV9 310 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 LINC01555Q8NAE3 123 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 TTLQ8NG68 377 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 OR9A2Q8NGT5 310 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PIGXQ8TBF5 258 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 COL26A1Q96A83 441 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 AUNIPQ9H7T9 357 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PIPOXQ9P0Z9 390 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 WDPCPO95876 746 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 ATP5A1P25705 553 aaKnown RBP22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 E2F1Q01094 437 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 GRM7Q14831 915 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 AMZ2Q86W34 360 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 IZUMO1Q8IYV9 350 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 OR13C5Q8NGS8 318 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 SUN3Q8TAQ9 357 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 SETD7Q8WTS6 366 aaKnown RBP22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 ST8SIA2Q92186 375 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 HCAR1Q9BXC0 346 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 NPDC1Q9NQX5 325 aaPredicted RBP22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 PDCD5O14737 125 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 GCGRP47871 477 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 TAS2R38P59533 333 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 TRAM2Q15035 370 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 OR10H4Q8NGA5 316 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 PCDHB16Q9NRJ7 776 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 MED17Q9NVC6 651 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 IL20Q9NYY1 176 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 ENTPD4Q9Y227 616 aa22.28■■□□□ 1.16
CSNK1E-203ENST00000396832 MID1O15344 667 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 GDNFP39905 211 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 FRKP42685 505 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 RGS8P57771 180 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 DHODHQ02127 395 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 CXXC5Q7LFL8 322 aaKnown RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 CNOT9Q92600 299 aaKnown RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 CA10Q9NS85 328 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 FBXL2Q9UKC9 423 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 REV3LO60673 3130 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 DAPL1A0PJW8 107 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 TSPAN11A1L157 253 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 GATBO75879 557 aaKnown RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 THY1P04216 161 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 RAB3BP20337 219 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 CERS1P27544 350 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 B2MP61769 119 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 SIM1P81133 766 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 SEC22CQ9BRL7 303 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 ENKD1Q9H0I2 346 aa22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 NFKBIL1Q9UBC1 381 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-203ENST00000396832 MCRIP1C9JLW8 97 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 FGF2P09038 288 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ACVR1BP36896 505 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ST8SIA6P61647 398 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 GNA13Q14344 377 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ATRAIDQ6UW56 229 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 BVESQ8NE79 360 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 PPP1R16AQ96I34 528 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 OR7D2Q96RA2 312 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ORAI3Q9BRQ5 295 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 RHBGQ9H310 441 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 TTYH1Q9H313 450 aaPredicted RBP22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ZNF275Q9NSD4 429 aaPredicted RBP22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 ZNF175Q9Y473 711 aa22.27■■□□□ 1.15
CSNK1E-203ENST00000396832 IGKV1-8A0A0C4DH67 115 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 CENPVL1A0A0U1RR11 272 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 A0A1W2PR48 441 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 ZIC2O95409 532 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 CXCL14O95715 111 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 STAT5AP42229 794 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 FNDC3BQ53EP0 1204 aaKnown RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 METTL11BQ5VVY1 283 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 WDR89Q96FK6 387 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 PELOQ9BRX2 385 aaKnown RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC38A1Q9H2H9 487 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 SLC6A15Q9H2J7 730 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 DPEP2Q9H4A9 486 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 CAMK2AQ9UQM7 478 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 A0A1W2PPV9 198 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 PRR23D1E9PI22 279 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 MAGEB4O15481 346 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 FGF18O76093 207 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 PRR23D2P0DMB1 279 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 ATF1P18846 271 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 ERVK-21P61565 698 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 HTR4Q13639 388 aa22.26■■□□□ 1.15
CSNK1E-203ENST00000396832 CAMK1Q14012 370 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms