RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MGAT4AQ9UM21 535 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 DAPP1Q9UN19 280 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ING4Q9UNL4 249 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 POFUT2Q9Y2G5 429 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR1A2Q9Y585 309 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IGKV3D-11A0A0A0MRZ8 115 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A1W2PR48 441 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TCRBV21S2A2A0A5A6 115 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 POM121BA6NF01 834 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PRAMEF25A6NGN4 478 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ETV2O00321 342 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 NUDT21O43809 227 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 LYPD3O95274 346 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PRKAR1AP10644 381 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GALP22466 123 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 CAPZBP47756 277 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ILKQ13418 452 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GAS6Q14393 721 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ELOCQ15369 112 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SF3A2Q15428 464 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 PYDC2Q56P42 97 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 METAP1DQ6UB28 335 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF600Q6ZNG1 722 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 Q6ZSR6 202 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OVCH2Q7RTZ1 564 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GKN2Q86XP6 184 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 NAGSQ8N159 534 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SLC37A3Q8NCC5 494 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR4E2Q8NGC2 313 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 HGDQ93099 445 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 UCN3Q969E3 161 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MED8Q96G25 268 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 AHCYL2Q96HN2 611 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 DIRAS2Q96HU8 199 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MS4A4EQ96PG1 132 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR1F2PQ96R84 312 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TMEM43Q9BTV4 400 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MED18Q9BUE0 208 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PRR14Q9BWN1 585 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SLC6A17Q9H1V8 727 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR51B5Q9H339 312 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GLIPR2Q9H4G4 154 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 FOLH1BQ9HBA9 442 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 EXOSC3Q9NQT5 275 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 TM7SF3Q9NS93 570 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ACER3Q9NUN7 267 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MED17Q9NVC6 651 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MED9Q9NWA0 146 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SLCO1C1Q9NYB5 712 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 NLKQ9UBE8 527 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 P2RX2Q9UBL9 471 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 FTSJ1Q9UET6 329 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 UBQLN2Q9UHD9 624 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 KIF25Q9UIL4 384 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PCDHB10Q9UN67 800 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PRELID3BQ9Y3B1 194 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MMACHCQ9Y4U1 282 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A0B4J203 849 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 MFSD2BA6NFX1 497 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ZNF98A6NK75 572 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ZAR1LA6NP61 321 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 RFXAPO00287 272 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 TPST2O60704 377 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 NKX2-2O95096 273 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 PCDH8O95206 1070 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 NSA2O95478 260 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 PAK4O96013 591 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 TGFB1P01137 390 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SLC2A2P11168 524 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 CSNK2A2P19784 350 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 S1PR1P21453 382 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 F8A1P23610 371 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 PSMA1P25786 263 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 ACSL1P33121 698 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 GDI2P50395 445 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 AGFG1P52594 562 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 SKP1P63208 163 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CDK6Q00534 326 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 MEF2AQ02078 507 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 ACSM1Q08AH1 577 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 C2orf80Q0P641 193 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SCARB2Q14108 478 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ZNF141Q15928 474 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS41-203ENST00000395969 KLHL22Q53GT1 634 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 DDI2Q5TDH0 399 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 FIP1L1Q6UN15 594 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 VTCN1Q7Z7D3 282 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ZNF595Q8IYB9 648 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 RNF113BQ8IZP6 322 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 ATP6V1C2Q8NEY4 427 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 OR6S1Q8NH40 331 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CLHC1Q8NHS4 586 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 PHF21AQ96BD5 680 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ELP4Q96EB1 424 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SLC41A2Q96JW4 573 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 HSH2DQ96JZ2 352 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 LINC00052Q96N35 136 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms