RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SCN2BO60939 215 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 SNNO75324 88 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 CGAP01215 116 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 RAF1P04049 648 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ALDOCP09972 364 aaKnown RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 IDO1P14902 403 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 PRKCAP17252 672 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 UFM1P61960 85 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 PHC1P78364 1004 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 TXNL4AP83876 142 aaKnown RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 SELENBP1Q13228 472 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 QPRTQ15274 297 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 RNPS1Q15287 305 aaKnown RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 NDUFAF6Q330K2 333 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 GPAT3Q53EU6 434 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 SAXO2Q658L1 398 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF621Q6ZSS3 439 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 GLB1L3Q8NCI6 653 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 RAB8BQ92930 207 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ROPN1LQ96C74 230 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ARSGQ96EG1 525 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 CCDC115Q96NT0 180 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF350Q9GZX5 532 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 LAT2Q9GZY6 243 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 LIME1Q9H400 295 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 SERHL2Q9H4I8 314 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 SLC35A3Q9Y2D2 325 aa12.31□□□□□ -0.44
CXCL12-205ENST00000395794 ANKHD1Q8IWZ3 2542 aaKnown RBP12.31□□□□□ -0.44
CXCL12-205ENST00000395794 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 UGT2B17O75795 530 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 HRGP04196 525 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 PGRP06401 933 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 GUSBP08236 651 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 UBTFL6P0CB48 400 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-205ENST00000395794 PGCP20142 388 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 IL11P20809 199 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
CXCL12-205ENST00000395794 GUSBP1Q15486 140 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 TOMM34Q15785 309 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-205ENST00000395794 HEPHL1Q6MZM0 1159 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 THUMPD3Q9BV44 507 aaKnown RBP12.3□□□□□ -0.44
CXCL12-205ENST00000395794 LIPT1Q9Y234 373 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
CXCL12-205ENST00000395794 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 KIAA0513O60268 411 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 SLC22A3O75751 556 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 PRKD3O94806 890 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 KRT75O95678 551 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 IL6P05231 212 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 PPP3CBP16298 524 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 SKP2Q13309 424 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 GNA13Q14344 377 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 GSTA3Q16772 222 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 TIGD2Q4W5G0 525 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 TYW3Q6IPR3 259 aaKnown RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 C3orf33Q6P1S2 294 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 RNF130Q86XS8 419 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF619Q8N2I2 560 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 SLC43A2Q8N370 569 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF563Q8TA94 476 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ZFP90Q8TF47 636 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ROBO4Q8WZ75 1007 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 TACO1Q9BSH4 297 aaKnown RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 C12orf49Q9H741 205 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 PLEKHF2Q9H8W4 249 aa12.29□□□□□ -0.44
CXCL12-205ENST00000395794 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 C6orf203Q9P0P8 240 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 SPIN1Q9Y657 262 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-205ENST00000395794 C9JVG2 144 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 RFXANKO14593 260 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 KLF11O14901 512 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 EFNA2O43921 213 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 DIAPH2O60879 1101 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 ANP32DO95626 131 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 NTN1O95631 604 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 CRYGSP22914 178 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 SHC1P29353 583 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 AGTR1P30556 359 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 RAC3P60763 192 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 MERTKQ12866 999 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 PDCD4Q53EL6 469 aaKnown RBP12.28□□□□□ -0.44
CXCL12-205ENST00000395794 AGBL2Q5U5Z8 902 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 ANKRD34AQ69YU3 496 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms