RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 H3BNH8 94 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 RNASET2O00584 256 aaKnown RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 BIRC5O15392 142 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 RGS16O15492 202 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 ZNF264O43296 627 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 DNAJA2O60884 412 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 BCAS1O75363 584 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 UGT2B17O75795 530 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 H6PDO95479 791 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 PPP3CBP16298 524 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 PSMB1P20618 241 aaKnown RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 BGNP21810 368 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 CCR4P51679 360 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 QPRTQ15274 297 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 GPR68Q15743 365 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 ZNF141Q15928 474 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 TNFAIP8L3Q5GJ75 292 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 BEX5Q5H9J7 111 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 HEPHL1Q6MZM0 1159 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 TFAP2EQ6VUC0 442 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 BEND4Q6ZU67 534 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 FCRLAQ7L513 359 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 WFDC8Q8IUA0 241 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 TUSC5Q8IXB3 177 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 GABRG1Q8N1C3 465 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 CIARTQ8N365 385 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 TMCO5AQ8N6Q1 288 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 OR4A15Q8NGL6 344 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 PIGTQ969N2 578 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 MRGPRX4Q96LA9 322 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 PARD6BQ9BYG5 372 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 ZNF350Q9GZX5 532 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 QRSL1Q9H0R6 528 aaKnown RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 OR51I1Q9H343 314 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 SSU72Q9NP77 194 aaKnown RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 HAO1Q9UJM8 370 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 ING1Q9UK53 422 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-204ENST00000395793 MKLN1Q9UL63 735 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 EIF4E2O60573 245 aaKnown RBP16.04■□□□□ 0.16
CXCL12-204ENST00000395793 SOX30O94993 753 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 INHBBP09529 407 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 MYZAPP0CAP1 466 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 FPR1P21462 350 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 ENPP1P22413 925 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 EDNRAP25101 427 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 SLC1A6P48664 564 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 PLAURQ03405 335 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 SELENBP1Q13228 472 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 MAPK14Q16539 360 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 ARHGAP11BQ3KRB8 267 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 BHLHB9Q6PI77 547 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 ZNF704Q6ZNC4 412 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-204ENST00000395793 C20orf204Q6ZNR8 217 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 BIVMQ86UB2 503 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 P3H2Q8IVL5 708 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 MIPOL1Q8TD10 442 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 RAB8BQ92930 207 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 PERPQ96FX8 193 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 PLPPR2Q96GM1 343 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 TMEM204Q9BSN7 226 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 DPY30Q9C005 99 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 GPR52Q9Y2T5 361 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 USF3Q68DE3 2245 aa16.04■□□□□ 0.16
CXCL12-204ENST00000395793 FN1P02751 2386 aaKnown RBP16.04■□□□□ 0.16
CXCL12-204ENST00000395793 PRAMEF27A3QJZ7 478 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TM9SF1O15321 606 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 STX11O75558 287 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 CPSF4O95639 269 aaKnown RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 OR12D1P0DN82 309 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 RPL14P50914 215 aaKnown RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 RNPS1Q15287 305 aaKnown RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 SPANXN4Q5MJ08 99 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TMEM201Q5SNT2 666 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 SAXO2Q658L1 398 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TNFAIP8L2Q6P589 184 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 HMGN2P46Q86SG4 172 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 STK32CQ86UX6 486 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TOR1AIP2Q8NFQ8 470 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TESCQ96BS2 214 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 S100PBPQ96BU1 408 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 NUF2Q9BZD4 464 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 LAT2Q9GZY6 243 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 PNPOQ9NVS9 261 aa16.03■□□□□ 0.16
CXCL12-204ENST00000395793 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-204ENST00000395793 DUXAA6NLW8 204 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 GJE1A6NN92 205 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 SMAD9O15198 467 aaKnown RBP16.02■□□□□ 0.16
CXCL12-204ENST00000395793 ARHGEF9O43307 516 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 KIAA0513O60268 411 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 PRKD3O94806 890 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 AK1P00568 194 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 ALDOCP09972 364 aaKnown RBP16.02■□□□□ 0.16
CXCL12-204ENST00000395793 PABPC4LP0CB38 370 aaKnown RBP16.02■□□□□ 0.16
CXCL12-204ENST00000395793 UBTFL6P0CB48 400 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-204ENST00000395793 SESN3P58005 492 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 LTBQ06643 244 aa16.02■□□□□ 0.16
CXCL12-204ENST00000395793 CBFBQ13951 182 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms